Gene : Cagra.3598s0010 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  10
Name:  ? Cagra.3598s0010 Secondary Identifier:  ? PAC:28906416
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3598s0010 0.5kb upstream 0.5kb upstream 1893 true Scaffold3598: 37959-39851 Capsella grandiflora
Cagra.3598s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3598: 39352-39851 Capsella grandiflora
Cagra.3598s0010 0.5kb downstream 0.5kb downstream 1893 true Scaffold3598: 37459-39351 Capsella grandiflora
Cagra.3598s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3598: 37459-37958 Capsella grandiflora
Cagra.3598s0010 1.0kb upstream 1.0kb upstream 2393 true Scaffold3598: 37959-40351 Capsella grandiflora
Cagra.3598s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3598: 39352-40351 Capsella grandiflora
Cagra.3598s0010 1.0kb downstream 1.0kb downstream 2393 true Scaffold3598: 36959-39351 Capsella grandiflora
Cagra.3598s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3598: 36959-37958 Capsella grandiflora
Cagra.3598s0010 2.0kb upstream 2.0kb upstream 3393 true Scaffold3598: 37959-41351 Capsella grandiflora
Cagra.3598s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold3598: 39352-41351 Capsella grandiflora
Cagra.3598s0010 2.0kb downstream 2.0kb downstream 3393 true Scaffold3598: 35959-39351 Capsella grandiflora
Cagra.3598s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3598: 35959-37958 Capsella grandiflora
Cagra.3598s0010 5.0kb upstream 5.0kb upstream 6393 true Scaffold3598: 37959-44351 Capsella grandiflora
Cagra.3598s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold3598: 39352-44351 Capsella grandiflora
Cagra.3598s0010 5.0kb downstream 5.0kb downstream 6393 true Scaffold3598: 32959-39351 Capsella grandiflora
Cagra.3598s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold3598: 32959-37958 Capsella grandiflora
Cagra.3598s0010 10.0kb upstream 10.0kb upstream 11393 true Scaffold3598: 37959-49351 Capsella grandiflora
Cagra.3598s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold3598: 39352-49351 Capsella grandiflora
Cagra.3598s0010 10.0kb downstream 10.0kb downstream 11393 true Scaffold3598: 27959-39351 Capsella grandiflora
Cagra.3598s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold3598: 27959-37958 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365188 5261 Brassicaceae View MSA
123798911 5264 Brassicales-Malvales View MSA
124346450 5266 SBM View MSA
124243436 5268 Malvidae View MSA
124074689 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain