Gene : Cagra.0352s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10497 - 60S RIBOSOMAL PROTEIN L27 Genomic Order:  9
Name:  ? Cagra.0352s0009 Secondary Identifier:  ? PAC:28897280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0352s0009 0.5kb upstream 0.5kb upstream 908 true Scaffold352: 27435-28342 Capsella grandiflora
Cagra.0352s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold352: 27435-27934 Capsella grandiflora
Cagra.0352s0009 0.5kb downstream 0.5kb downstream 908 true Scaffold352: 27935-28842 Capsella grandiflora
Cagra.0352s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold352: 28343-28842 Capsella grandiflora
Cagra.0352s0009 1.0kb upstream 1.0kb upstream 1408 true Scaffold352: 26935-28342 Capsella grandiflora
Cagra.0352s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold352: 26935-27934 Capsella grandiflora
Cagra.0352s0009 1.0kb downstream 1.0kb downstream 1408 true Scaffold352: 27935-29342 Capsella grandiflora
Cagra.0352s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold352: 28343-29342 Capsella grandiflora
Cagra.0352s0009 2.0kb upstream 2.0kb upstream 2408 true Scaffold352: 25935-28342 Capsella grandiflora
Cagra.0352s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold352: 25935-27934 Capsella grandiflora
Cagra.0352s0009 2.0kb downstream 2.0kb downstream 2408 true Scaffold352: 27935-30342 Capsella grandiflora
Cagra.0352s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold352: 28343-30342 Capsella grandiflora
Cagra.0352s0009 5.0kb upstream 5.0kb upstream 5408 true Scaffold352: 22935-28342 Capsella grandiflora
Cagra.0352s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold352: 22935-27934 Capsella grandiflora
Cagra.0352s0009 5.0kb downstream 5.0kb downstream 5408 true Scaffold352: 27935-33342 Capsella grandiflora
Cagra.0352s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold352: 28343-33342 Capsella grandiflora
Cagra.0352s0009 10.0kb upstream 10.0kb upstream 10408 true Scaffold352: 17935-28342 Capsella grandiflora
Cagra.0352s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold352: 17935-27934 Capsella grandiflora
Cagra.0352s0009 10.0kb downstream 10.0kb downstream 10408 true Scaffold352: 27935-38342 Capsella grandiflora
Cagra.0352s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold352: 28343-38342 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338290 5261 Brassicaceae View MSA
123778883 5264 Brassicales-Malvales View MSA
124277219 5266 SBM View MSA
124132441 5268 Malvidae View MSA
123860747 5270 Rosid View MSA
123741736 5271 Pentapetalae View MSA
122786015 5272 Eudicot View MSA
122045020 5273 Angiosperm View MSA
121345737 5274 Embryophyte View MSA
123427909 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain