Gene : Cagra.3862s0002 C. grandiflora v1.1
Defline:  (1 of 61) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  2
Name:  ? Cagra.3862s0002 Secondary Identifier:  ? PAC:28905083
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3862s0002 0.5kb upstream 0.5kb upstream 788 true Scaffold3862: 6343-7130 Capsella grandiflora
Cagra.3862s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3862: 6631-7130 Capsella grandiflora
Cagra.3862s0002 0.5kb downstream 0.5kb downstream 788 true Scaffold3862: 5843-6630 Capsella grandiflora
Cagra.3862s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3862: 5843-6342 Capsella grandiflora
Cagra.3862s0002 1.0kb upstream 1.0kb upstream 1288 true Scaffold3862: 6343-7630 Capsella grandiflora
Cagra.3862s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3862: 6631-7630 Capsella grandiflora
Cagra.3862s0002 1.0kb downstream 1.0kb downstream 1288 true Scaffold3862: 5343-6630 Capsella grandiflora
Cagra.3862s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3862: 5343-6342 Capsella grandiflora
Cagra.3862s0002 2.0kb upstream 2.0kb upstream 2288 true Scaffold3862: 6343-8630 Capsella grandiflora
Cagra.3862s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3862: 6631-8630 Capsella grandiflora
Cagra.3862s0002 2.0kb downstream 2.0kb downstream 2288 true Scaffold3862: 4343-6630 Capsella grandiflora
Cagra.3862s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3862: 4343-6342 Capsella grandiflora
Cagra.3862s0002 5.0kb upstream 5.0kb upstream 5288 true Scaffold3862: 6343-11630 Capsella grandiflora
Cagra.3862s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3862: 6631-11630 Capsella grandiflora
Cagra.3862s0002 5.0kb downstream 5.0kb downstream 5288 true Scaffold3862: 1343-6630 Capsella grandiflora
Cagra.3862s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3862: 1343-6342 Capsella grandiflora
Cagra.3862s0002 10.0kb upstream 10.0kb upstream 8317 true Scaffold3862: 6343-14659 Capsella grandiflora
Cagra.3862s0002 10.0kb upstream 10.0kb upstream 8029 false Scaffold3862: 6631-14659 Capsella grandiflora
Cagra.3862s0002 10.0kb downstream 10.0kb downstream 6630 true Scaffold3862: 1-6630 Capsella grandiflora
Cagra.3862s0002 10.0kb downstream 10.0kb downstream 6342 false Scaffold3862: 1-6342 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381748 5261 Brassicaceae View MSA
123803417 5264 Brassicales-Malvales View MSA
124300529 5266 SBM View MSA
124250916 5268 Malvidae View MSA
124071320 5270 Rosid View MSA
123749514 5271 Pentapetalae View MSA
122786269 5272 Eudicot View MSA
122049999 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain