Gene : Cagra.0389s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33133:SF5 - EXPRESSED PROTEIN Genomic Order:  5
Name:  ? Cagra.0389s0005 Secondary Identifier:  ? PAC:28916351
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0389s0005 0.5kb upstream 0.5kb upstream 1755 true Scaffold389: 7821-9575 Capsella grandiflora
Cagra.0389s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold389: 7821-8320 Capsella grandiflora
Cagra.0389s0005 0.5kb downstream 0.5kb downstream 1755 true Scaffold389: 8321-10075 Capsella grandiflora
Cagra.0389s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold389: 9576-10075 Capsella grandiflora
Cagra.0389s0005 1.0kb upstream 1.0kb upstream 2255 true Scaffold389: 7321-9575 Capsella grandiflora
Cagra.0389s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold389: 7321-8320 Capsella grandiflora
Cagra.0389s0005 1.0kb downstream 1.0kb downstream 2255 true Scaffold389: 8321-10575 Capsella grandiflora
Cagra.0389s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold389: 9576-10575 Capsella grandiflora
Cagra.0389s0005 2.0kb upstream 2.0kb upstream 3255 true Scaffold389: 6321-9575 Capsella grandiflora
Cagra.0389s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold389: 6321-8320 Capsella grandiflora
Cagra.0389s0005 2.0kb downstream 2.0kb downstream 3255 true Scaffold389: 8321-11575 Capsella grandiflora
Cagra.0389s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold389: 9576-11575 Capsella grandiflora
Cagra.0389s0005 5.0kb upstream 5.0kb upstream 6255 true Scaffold389: 3321-9575 Capsella grandiflora
Cagra.0389s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold389: 3321-8320 Capsella grandiflora
Cagra.0389s0005 5.0kb downstream 5.0kb downstream 6255 true Scaffold389: 8321-14575 Capsella grandiflora
Cagra.0389s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold389: 9576-14575 Capsella grandiflora
Cagra.0389s0005 10.0kb upstream 10.0kb upstream 9575 true Scaffold389: 1-9575 Capsella grandiflora
Cagra.0389s0005 10.0kb upstream 10.0kb upstream 8320 false Scaffold389: 1-8320 Capsella grandiflora
Cagra.0389s0005 10.0kb downstream 10.0kb downstream 11255 true Scaffold389: 8321-19575 Capsella grandiflora
Cagra.0389s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold389: 9576-19575 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378206 5261 Brassicaceae View MSA
123834577 5264 Brassicales-Malvales View MSA
124344793 5266 SBM View MSA
124252340 5268 Malvidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain