Gene : Cagra.3910s0003 C. grandiflora v1.1
Defline:  (1 of 9) PTHR31623:SF15 - ACETYL-COA:BENZYLALCOHOL ACETYLTRANFERASE-LIKE PROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.3910s0003 Secondary Identifier:  ? PAC:28903330
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3910s0003 0.5kb upstream 0.5kb upstream 1499 true Scaffold3910: 17193-18691 Capsella grandiflora
Cagra.3910s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3910: 18192-18691 Capsella grandiflora
Cagra.3910s0003 0.5kb downstream 0.5kb downstream 1499 true Scaffold3910: 16693-18191 Capsella grandiflora
Cagra.3910s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3910: 16693-17192 Capsella grandiflora
Cagra.3910s0003 1.0kb upstream 1.0kb upstream 1999 true Scaffold3910: 17193-19191 Capsella grandiflora
Cagra.3910s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3910: 18192-19191 Capsella grandiflora
Cagra.3910s0003 1.0kb downstream 1.0kb downstream 1999 true Scaffold3910: 16193-18191 Capsella grandiflora
Cagra.3910s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3910: 16193-17192 Capsella grandiflora
Cagra.3910s0003 2.0kb upstream 2.0kb upstream 2999 true Scaffold3910: 17193-20191 Capsella grandiflora
Cagra.3910s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3910: 18192-20191 Capsella grandiflora
Cagra.3910s0003 2.0kb downstream 2.0kb downstream 2999 true Scaffold3910: 15193-18191 Capsella grandiflora
Cagra.3910s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3910: 15193-17192 Capsella grandiflora
Cagra.3910s0003 5.0kb upstream 5.0kb upstream 5999 true Scaffold3910: 17193-23191 Capsella grandiflora
Cagra.3910s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3910: 18192-23191 Capsella grandiflora
Cagra.3910s0003 5.0kb downstream 5.0kb downstream 5999 true Scaffold3910: 12193-18191 Capsella grandiflora
Cagra.3910s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3910: 12193-17192 Capsella grandiflora
Cagra.3910s0003 10.0kb upstream 10.0kb upstream 10999 true Scaffold3910: 17193-28191 Capsella grandiflora
Cagra.3910s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3910: 18192-28191 Capsella grandiflora
Cagra.3910s0003 10.0kb downstream 10.0kb downstream 10999 true Scaffold3910: 7193-18191 Capsella grandiflora
Cagra.3910s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold3910: 7193-17192 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333663 5261 Brassicaceae Singleton cluster - no MSA
123841996 5264 Brassicales-Malvales View MSA
124349411 5266 SBM View MSA
124247156 5268 Malvidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain