Gene : Cagra.3807s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32382:SF15 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3-RELATED Genomic Order:  9
Name:  ? Cagra.3807s0009 Secondary Identifier:  ? PAC:28899192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3807s0009 0.5kb upstream 0.5kb upstream 1361 true Scaffold3807: 33414-34774 Capsella grandiflora
Cagra.3807s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3807: 34275-34774 Capsella grandiflora
Cagra.3807s0009 0.5kb downstream 0.5kb downstream 1361 true Scaffold3807: 32914-34274 Capsella grandiflora
Cagra.3807s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3807: 32914-33413 Capsella grandiflora
Cagra.3807s0009 1.0kb upstream 1.0kb upstream 1861 true Scaffold3807: 33414-35274 Capsella grandiflora
Cagra.3807s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3807: 34275-35274 Capsella grandiflora
Cagra.3807s0009 1.0kb downstream 1.0kb downstream 1861 true Scaffold3807: 32414-34274 Capsella grandiflora
Cagra.3807s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3807: 32414-33413 Capsella grandiflora
Cagra.3807s0009 2.0kb upstream 2.0kb upstream 2861 true Scaffold3807: 33414-36274 Capsella grandiflora
Cagra.3807s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3807: 34275-36274 Capsella grandiflora
Cagra.3807s0009 2.0kb downstream 2.0kb downstream 2861 true Scaffold3807: 31414-34274 Capsella grandiflora
Cagra.3807s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3807: 31414-33413 Capsella grandiflora
Cagra.3807s0009 5.0kb upstream 5.0kb upstream 5861 true Scaffold3807: 33414-39274 Capsella grandiflora
Cagra.3807s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3807: 34275-39274 Capsella grandiflora
Cagra.3807s0009 5.0kb downstream 5.0kb downstream 5861 true Scaffold3807: 28414-34274 Capsella grandiflora
Cagra.3807s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold3807: 28414-33413 Capsella grandiflora
Cagra.3807s0009 10.0kb upstream 10.0kb upstream 10861 true Scaffold3807: 33414-44274 Capsella grandiflora
Cagra.3807s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3807: 34275-44274 Capsella grandiflora
Cagra.3807s0009 10.0kb downstream 10.0kb downstream 10861 true Scaffold3807: 23414-34274 Capsella grandiflora
Cagra.3807s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold3807: 23414-33413 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378684 5261 Brassicaceae View MSA
123801957 5264 Brassicales-Malvales View MSA
124299199 5266 SBM View MSA
124150677 5268 Malvidae View MSA
124069244 5270 Rosid View MSA
123749188 5271 Pentapetalae View MSA
122790622 5272 Eudicot View MSA
122051628 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain