Gene : Cagra.3822s0002 C. grandiflora v1.1
Defline:  (1 of 1) PF17032 - zinc-ribbon family (zinc_ribbon_15) Genomic Order:  2
Name:  ? Cagra.3822s0002 Secondary Identifier:  ? PAC:28896020
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3822s0002 0.5kb upstream 0.5kb upstream 812 true Scaffold3822: 5404-6215 Capsella grandiflora
Cagra.3822s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3822: 5404-5903 Capsella grandiflora
Cagra.3822s0002 0.5kb downstream 0.5kb downstream 812 true Scaffold3822: 5904-6715 Capsella grandiflora
Cagra.3822s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3822: 6216-6715 Capsella grandiflora
Cagra.3822s0002 1.0kb upstream 1.0kb upstream 1312 true Scaffold3822: 4904-6215 Capsella grandiflora
Cagra.3822s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3822: 4904-5903 Capsella grandiflora
Cagra.3822s0002 1.0kb downstream 1.0kb downstream 1312 true Scaffold3822: 5904-7215 Capsella grandiflora
Cagra.3822s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3822: 6216-7215 Capsella grandiflora
Cagra.3822s0002 2.0kb upstream 2.0kb upstream 2312 true Scaffold3822: 3904-6215 Capsella grandiflora
Cagra.3822s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3822: 3904-5903 Capsella grandiflora
Cagra.3822s0002 2.0kb downstream 2.0kb downstream 2312 true Scaffold3822: 5904-8215 Capsella grandiflora
Cagra.3822s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3822: 6216-8215 Capsella grandiflora
Cagra.3822s0002 5.0kb upstream 5.0kb upstream 5312 true Scaffold3822: 904-6215 Capsella grandiflora
Cagra.3822s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3822: 904-5903 Capsella grandiflora
Cagra.3822s0002 5.0kb downstream 5.0kb downstream 5312 true Scaffold3822: 5904-11215 Capsella grandiflora
Cagra.3822s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3822: 6216-11215 Capsella grandiflora
Cagra.3822s0002 10.0kb upstream 10.0kb upstream 6215 true Scaffold3822: 1-6215 Capsella grandiflora
Cagra.3822s0002 10.0kb upstream 10.0kb upstream 5903 false Scaffold3822: 1-5903 Capsella grandiflora
Cagra.3822s0002 10.0kb downstream 10.0kb downstream 7223 true Scaffold3822: 5904-13126 Capsella grandiflora
Cagra.3822s0002 10.0kb downstream 10.0kb downstream 6911 false Scaffold3822: 6216-13126 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377778 5261 Brassicaceae View MSA
123828665 5264 Brassicales-Malvales View MSA
124338462 5266 SBM View MSA
124238077 5268 Malvidae View MSA
124062636 5270 Rosid View MSA
123738402 5271 Pentapetalae View MSA
122790181 5272 Eudicot View MSA
122042954 5273 Angiosperm View MSA
121350440 5274 Embryophyte View MSA
123425702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain