Gene : Cagra.0380s0085 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22595:SF43 - EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED Genomic Order:  85
Name:  ? Cagra.0380s0085 Secondary Identifier:  ? PAC:28902175
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0085 0.5kb upstream 0.5kb upstream 743 true Scaffold380: 319323-320065 Capsella grandiflora
Cagra.0380s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold380: 319566-320065 Capsella grandiflora
Cagra.0380s0085 0.5kb downstream 0.5kb downstream 743 true Scaffold380: 318823-319565 Capsella grandiflora
Cagra.0380s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 318823-319322 Capsella grandiflora
Cagra.0380s0085 1.0kb upstream 1.0kb upstream 1243 true Scaffold380: 319323-320565 Capsella grandiflora
Cagra.0380s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold380: 319566-320565 Capsella grandiflora
Cagra.0380s0085 1.0kb downstream 1.0kb downstream 1243 true Scaffold380: 318323-319565 Capsella grandiflora
Cagra.0380s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 318323-319322 Capsella grandiflora
Cagra.0380s0085 2.0kb upstream 2.0kb upstream 2243 true Scaffold380: 319323-321565 Capsella grandiflora
Cagra.0380s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold380: 319566-321565 Capsella grandiflora
Cagra.0380s0085 2.0kb downstream 2.0kb downstream 2243 true Scaffold380: 317323-319565 Capsella grandiflora
Cagra.0380s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 317323-319322 Capsella grandiflora
Cagra.0380s0085 5.0kb upstream 5.0kb upstream 5243 true Scaffold380: 319323-324565 Capsella grandiflora
Cagra.0380s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold380: 319566-324565 Capsella grandiflora
Cagra.0380s0085 5.0kb downstream 5.0kb downstream 5243 true Scaffold380: 314323-319565 Capsella grandiflora
Cagra.0380s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 314323-319322 Capsella grandiflora
Cagra.0380s0085 10.0kb upstream 10.0kb upstream 10243 true Scaffold380: 319323-329565 Capsella grandiflora
Cagra.0380s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold380: 319566-329565 Capsella grandiflora
Cagra.0380s0085 10.0kb downstream 10.0kb downstream 10243 true Scaffold380: 309323-319565 Capsella grandiflora
Cagra.0380s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 309323-319322 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333637 5261 Brassicaceae Singleton cluster - no MSA
123841262 5264 Brassicales-Malvales View MSA
124346425 5266 SBM View MSA
124249870 5268 Malvidae View MSA
124072622 5270 Rosid View MSA
123752466 5271 Pentapetalae View MSA
122795564 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain