Gene : Cagra.3744s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR35744:SF2 - C2H2 TYPE ZINC FINGER PROTEIN Genomic Order:  11
Name:  ? Cagra.3744s0011 Secondary Identifier:  ? PAC:28900829
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3744s0011 0.5kb upstream 0.5kb upstream 1947 true Scaffold3744: 25936-27882 Capsella grandiflora
Cagra.3744s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold3744: 25936-26435 Capsella grandiflora
Cagra.3744s0011 0.5kb downstream 0.5kb downstream 1947 true Scaffold3744: 26436-28382 Capsella grandiflora
Cagra.3744s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold3744: 27883-28382 Capsella grandiflora
Cagra.3744s0011 1.0kb upstream 1.0kb upstream 2447 true Scaffold3744: 25436-27882 Capsella grandiflora
Cagra.3744s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold3744: 25436-26435 Capsella grandiflora
Cagra.3744s0011 1.0kb downstream 1.0kb downstream 2447 true Scaffold3744: 26436-28882 Capsella grandiflora
Cagra.3744s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold3744: 27883-28882 Capsella grandiflora
Cagra.3744s0011 2.0kb upstream 2.0kb upstream 3447 true Scaffold3744: 24436-27882 Capsella grandiflora
Cagra.3744s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold3744: 24436-26435 Capsella grandiflora
Cagra.3744s0011 2.0kb downstream 2.0kb downstream 3447 true Scaffold3744: 26436-29882 Capsella grandiflora
Cagra.3744s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold3744: 27883-29882 Capsella grandiflora
Cagra.3744s0011 5.0kb upstream 5.0kb upstream 6447 true Scaffold3744: 21436-27882 Capsella grandiflora
Cagra.3744s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold3744: 21436-26435 Capsella grandiflora
Cagra.3744s0011 5.0kb downstream 5.0kb downstream 6447 true Scaffold3744: 26436-32882 Capsella grandiflora
Cagra.3744s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold3744: 27883-32882 Capsella grandiflora
Cagra.3744s0011 10.0kb upstream 10.0kb upstream 11447 true Scaffold3744: 16436-27882 Capsella grandiflora
Cagra.3744s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold3744: 16436-26435 Capsella grandiflora
Cagra.3744s0011 10.0kb downstream 10.0kb downstream 11447 true Scaffold3744: 26436-37882 Capsella grandiflora
Cagra.3744s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold3744: 27883-37882 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364164 5261 Brassicaceae View MSA
123832541 5264 Brassicales-Malvales View MSA
124341030 5266 SBM View MSA
124237492 5268 Malvidae View MSA
124072687 5270 Rosid View MSA
123739740 5271 Pentapetalae View MSA
122792191 5272 Eudicot View MSA
122045859 5273 Angiosperm View MSA
121347232 5274 Embryophyte View MSA
123425688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain