Gene : Cagra.4082s0004 C. grandiflora v1.1
Defline:  (1 of 6) PTHR12042:SF18 - ALPHA 1,4-GLYCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  4
Name:  ? Cagra.4082s0004 Secondary Identifier:  ? PAC:28896814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4082s0004 0.5kb upstream 0.5kb upstream 1727 true Scaffold4082: 24926-26652 Capsella grandiflora
Cagra.4082s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4082: 26153-26652 Capsella grandiflora
Cagra.4082s0004 0.5kb downstream 0.5kb downstream 1727 true Scaffold4082: 24426-26152 Capsella grandiflora
Cagra.4082s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4082: 24426-24925 Capsella grandiflora
Cagra.4082s0004 1.0kb upstream 1.0kb upstream 2227 true Scaffold4082: 24926-27152 Capsella grandiflora
Cagra.4082s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4082: 26153-27152 Capsella grandiflora
Cagra.4082s0004 1.0kb downstream 1.0kb downstream 2227 true Scaffold4082: 23926-26152 Capsella grandiflora
Cagra.4082s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4082: 23926-24925 Capsella grandiflora
Cagra.4082s0004 2.0kb upstream 2.0kb upstream 3227 true Scaffold4082: 24926-28152 Capsella grandiflora
Cagra.4082s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4082: 26153-28152 Capsella grandiflora
Cagra.4082s0004 2.0kb downstream 2.0kb downstream 3227 true Scaffold4082: 22926-26152 Capsella grandiflora
Cagra.4082s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4082: 22926-24925 Capsella grandiflora
Cagra.4082s0004 5.0kb upstream 5.0kb upstream 6227 true Scaffold4082: 24926-31152 Capsella grandiflora
Cagra.4082s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4082: 26153-31152 Capsella grandiflora
Cagra.4082s0004 5.0kb downstream 5.0kb downstream 6227 true Scaffold4082: 19926-26152 Capsella grandiflora
Cagra.4082s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4082: 19926-24925 Capsella grandiflora
Cagra.4082s0004 10.0kb upstream 10.0kb upstream 11227 true Scaffold4082: 24926-36152 Capsella grandiflora
Cagra.4082s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4082: 26153-36152 Capsella grandiflora
Cagra.4082s0004 10.0kb downstream 10.0kb downstream 11227 true Scaffold4082: 14926-26152 Capsella grandiflora
Cagra.4082s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4082: 14926-24925 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364151 5261 Brassicaceae View MSA
123839292 5264 Brassicales-Malvales View MSA
124349102 5266 SBM View MSA
124244355 5268 Malvidae View MSA
124061006 5270 Rosid View MSA
123741255 5271 Pentapetalae View MSA
122792990 5272 Eudicot View MSA
122047260 5273 Angiosperm View MSA
121347765 5274 Embryophyte View MSA
123425560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain