Gene : Cagra.4084s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16007//PTHR16007:SF14 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  2
Name:  ? Cagra.4084s0002 Secondary Identifier:  ? PAC:28905235
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4084s0002 0.5kb upstream 0.5kb upstream 1676 true Scaffold4084: 5205-6880 Capsella grandiflora
Cagra.4084s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4084: 5205-5704 Capsella grandiflora
Cagra.4084s0002 0.5kb downstream 0.5kb downstream 1676 true Scaffold4084: 5705-7380 Capsella grandiflora
Cagra.4084s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4084: 6881-7380 Capsella grandiflora
Cagra.4084s0002 1.0kb upstream 1.0kb upstream 2176 true Scaffold4084: 4705-6880 Capsella grandiflora
Cagra.4084s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4084: 4705-5704 Capsella grandiflora
Cagra.4084s0002 1.0kb downstream 1.0kb downstream 2176 true Scaffold4084: 5705-7880 Capsella grandiflora
Cagra.4084s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4084: 6881-7880 Capsella grandiflora
Cagra.4084s0002 2.0kb upstream 2.0kb upstream 3176 true Scaffold4084: 3705-6880 Capsella grandiflora
Cagra.4084s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4084: 3705-5704 Capsella grandiflora
Cagra.4084s0002 2.0kb downstream 2.0kb downstream 3176 true Scaffold4084: 5705-8880 Capsella grandiflora
Cagra.4084s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4084: 6881-8880 Capsella grandiflora
Cagra.4084s0002 5.0kb upstream 5.0kb upstream 6176 true Scaffold4084: 705-6880 Capsella grandiflora
Cagra.4084s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4084: 705-5704 Capsella grandiflora
Cagra.4084s0002 5.0kb downstream 5.0kb downstream 6176 true Scaffold4084: 5705-11880 Capsella grandiflora
Cagra.4084s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4084: 6881-11880 Capsella grandiflora
Cagra.4084s0002 10.0kb upstream 10.0kb upstream 6880 true Scaffold4084: 1-6880 Capsella grandiflora
Cagra.4084s0002 10.0kb upstream 10.0kb upstream 5704 false Scaffold4084: 1-5704 Capsella grandiflora
Cagra.4084s0002 10.0kb downstream 10.0kb downstream 9416 true Scaffold4084: 5705-15120 Capsella grandiflora
Cagra.4084s0002 10.0kb downstream 10.0kb downstream 8240 false Scaffold4084: 6881-15120 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029799 5273 Angiosperm View MSA
122363837 5261 Brassicaceae View MSA
123829099 5264 Brassicales-Malvales View MSA
124345867 5266 SBM View MSA
124240044 5268 Malvidae View MSA
124062949 5270 Rosid View MSA
123736459 5271 Pentapetalae View MSA
122791594 5272 Eudicot View MSA
121299075 5274 Embryophyte View MSA
123336998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain