Gene : Cagra.4031s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31100:SF3 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Genomic Order:  18
Name:  ? Cagra.4031s0018 Secondary Identifier:  ? PAC:28904377
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4031s0018 0.5kb upstream 0.5kb upstream 1457 true Scaffold4031: 53443-54899 Capsella grandiflora
Cagra.4031s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold4031: 54400-54899 Capsella grandiflora
Cagra.4031s0018 0.5kb downstream 0.5kb downstream 1457 true Scaffold4031: 52943-54399 Capsella grandiflora
Cagra.4031s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold4031: 52943-53442 Capsella grandiflora
Cagra.4031s0018 1.0kb upstream 1.0kb upstream 1957 true Scaffold4031: 53443-55399 Capsella grandiflora
Cagra.4031s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold4031: 54400-55399 Capsella grandiflora
Cagra.4031s0018 1.0kb downstream 1.0kb downstream 1957 true Scaffold4031: 52443-54399 Capsella grandiflora
Cagra.4031s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold4031: 52443-53442 Capsella grandiflora
Cagra.4031s0018 2.0kb upstream 2.0kb upstream 2957 true Scaffold4031: 53443-56399 Capsella grandiflora
Cagra.4031s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold4031: 54400-56399 Capsella grandiflora
Cagra.4031s0018 2.0kb downstream 2.0kb downstream 2957 true Scaffold4031: 51443-54399 Capsella grandiflora
Cagra.4031s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold4031: 51443-53442 Capsella grandiflora
Cagra.4031s0018 5.0kb upstream 5.0kb upstream 5957 true Scaffold4031: 53443-59399 Capsella grandiflora
Cagra.4031s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold4031: 54400-59399 Capsella grandiflora
Cagra.4031s0018 5.0kb downstream 5.0kb downstream 5957 true Scaffold4031: 48443-54399 Capsella grandiflora
Cagra.4031s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold4031: 48443-53442 Capsella grandiflora
Cagra.4031s0018 10.0kb upstream 10.0kb upstream 10957 true Scaffold4031: 53443-64399 Capsella grandiflora
Cagra.4031s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold4031: 54400-64399 Capsella grandiflora
Cagra.4031s0018 10.0kb downstream 10.0kb downstream 10957 true Scaffold4031: 43443-54399 Capsella grandiflora
Cagra.4031s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold4031: 43443-53442 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373138 5261 Brassicaceae View MSA
123833259 5264 Brassicales-Malvales View MSA
124342679 5266 SBM View MSA
124251850 5268 Malvidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain