Gene : Cagra.4031s0050 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22880:SF153 - TRANSCRIPTION FACTOR GTE11-RELATED Genomic Order:  50
Name:  ? Cagra.4031s0050 Secondary Identifier:  ? PAC:28904356
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4031s0050 0.5kb upstream 0.5kb upstream 1460 true Scaffold4031: 161066-162525 Capsella grandiflora
Cagra.4031s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold4031: 162026-162525 Capsella grandiflora
Cagra.4031s0050 0.5kb downstream 0.5kb downstream 1460 true Scaffold4031: 160566-162025 Capsella grandiflora
Cagra.4031s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold4031: 160566-161065 Capsella grandiflora
Cagra.4031s0050 1.0kb upstream 1.0kb upstream 1960 true Scaffold4031: 161066-163025 Capsella grandiflora
Cagra.4031s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold4031: 162026-163025 Capsella grandiflora
Cagra.4031s0050 1.0kb downstream 1.0kb downstream 1960 true Scaffold4031: 160066-162025 Capsella grandiflora
Cagra.4031s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold4031: 160066-161065 Capsella grandiflora
Cagra.4031s0050 2.0kb upstream 2.0kb upstream 2960 true Scaffold4031: 161066-164025 Capsella grandiflora
Cagra.4031s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold4031: 162026-164025 Capsella grandiflora
Cagra.4031s0050 2.0kb downstream 2.0kb downstream 2960 true Scaffold4031: 159066-162025 Capsella grandiflora
Cagra.4031s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold4031: 159066-161065 Capsella grandiflora
Cagra.4031s0050 5.0kb upstream 5.0kb upstream 5960 true Scaffold4031: 161066-167025 Capsella grandiflora
Cagra.4031s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold4031: 162026-167025 Capsella grandiflora
Cagra.4031s0050 5.0kb downstream 5.0kb downstream 5960 true Scaffold4031: 156066-162025 Capsella grandiflora
Cagra.4031s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold4031: 156066-161065 Capsella grandiflora
Cagra.4031s0050 10.0kb upstream 10.0kb upstream 10960 true Scaffold4031: 161066-172025 Capsella grandiflora
Cagra.4031s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold4031: 162026-172025 Capsella grandiflora
Cagra.4031s0050 10.0kb downstream 10.0kb downstream 10960 true Scaffold4031: 151066-162025 Capsella grandiflora
Cagra.4031s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold4031: 151066-161065 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343161 5261 Brassicaceae View MSA
123783446 5264 Brassicales-Malvales View MSA
124281680 5266 SBM View MSA
124136397 5268 Malvidae View MSA
123864264 5270 Rosid View MSA
123751846 5271 Pentapetalae View MSA
122796315 5272 Eudicot View MSA
122048835 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121311132 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain