Gene : Cagra.0483s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33921:SF2 - CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED Genomic Order:  7
Name:  ? Cagra.0483s0007 Secondary Identifier:  ? PAC:28900377
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0483s0007 0.5kb upstream 0.5kb upstream 896 true Scaffold483: 16985-17880 Capsella grandiflora
Cagra.0483s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold483: 17381-17880 Capsella grandiflora
Cagra.0483s0007 0.5kb downstream 0.5kb downstream 896 true Scaffold483: 16485-17380 Capsella grandiflora
Cagra.0483s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold483: 16485-16984 Capsella grandiflora
Cagra.0483s0007 1.0kb upstream 1.0kb upstream 1396 true Scaffold483: 16985-18380 Capsella grandiflora
Cagra.0483s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold483: 17381-18380 Capsella grandiflora
Cagra.0483s0007 1.0kb downstream 1.0kb downstream 1396 true Scaffold483: 15985-17380 Capsella grandiflora
Cagra.0483s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold483: 15985-16984 Capsella grandiflora
Cagra.0483s0007 2.0kb upstream 2.0kb upstream 2396 true Scaffold483: 16985-19380 Capsella grandiflora
Cagra.0483s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold483: 17381-19380 Capsella grandiflora
Cagra.0483s0007 2.0kb downstream 2.0kb downstream 2396 true Scaffold483: 14985-17380 Capsella grandiflora
Cagra.0483s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold483: 14985-16984 Capsella grandiflora
Cagra.0483s0007 5.0kb upstream 5.0kb upstream 5396 true Scaffold483: 16985-22380 Capsella grandiflora
Cagra.0483s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold483: 17381-22380 Capsella grandiflora
Cagra.0483s0007 5.0kb downstream 5.0kb downstream 5396 true Scaffold483: 11985-17380 Capsella grandiflora
Cagra.0483s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold483: 11985-16984 Capsella grandiflora
Cagra.0483s0007 10.0kb upstream 10.0kb upstream 10396 true Scaffold483: 16985-27380 Capsella grandiflora
Cagra.0483s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold483: 17381-27380 Capsella grandiflora
Cagra.0483s0007 10.0kb downstream 10.0kb downstream 10396 true Scaffold483: 6985-17380 Capsella grandiflora
Cagra.0483s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold483: 6985-16984 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372519 5261 Brassicaceae View MSA
123841379 5264 Brassicales-Malvales View MSA
124347812 5266 SBM View MSA
124254040 5268 Malvidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain