Gene : Cagra.4170s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31636:SF4 - SCARECROW-LIKE PROTEIN 8 Genomic Order:  2
Name:  ? Cagra.4170s0002 Secondary Identifier:  ? PAC:28913217
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4170s0002 0.5kb upstream 0.5kb upstream 2501 true Scaffold4170: 6368-8868 Capsella grandiflora
Cagra.4170s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4170: 8369-8868 Capsella grandiflora
Cagra.4170s0002 0.5kb downstream 0.5kb downstream 2501 true Scaffold4170: 5868-8368 Capsella grandiflora
Cagra.4170s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4170: 5868-6367 Capsella grandiflora
Cagra.4170s0002 1.0kb upstream 1.0kb upstream 3001 true Scaffold4170: 6368-9368 Capsella grandiflora
Cagra.4170s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4170: 8369-9368 Capsella grandiflora
Cagra.4170s0002 1.0kb downstream 1.0kb downstream 3001 true Scaffold4170: 5368-8368 Capsella grandiflora
Cagra.4170s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4170: 5368-6367 Capsella grandiflora
Cagra.4170s0002 2.0kb upstream 2.0kb upstream 4001 true Scaffold4170: 6368-10368 Capsella grandiflora
Cagra.4170s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4170: 8369-10368 Capsella grandiflora
Cagra.4170s0002 2.0kb downstream 2.0kb downstream 4001 true Scaffold4170: 4368-8368 Capsella grandiflora
Cagra.4170s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4170: 4368-6367 Capsella grandiflora
Cagra.4170s0002 5.0kb upstream 5.0kb upstream 7001 true Scaffold4170: 6368-13368 Capsella grandiflora
Cagra.4170s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4170: 8369-13368 Capsella grandiflora
Cagra.4170s0002 5.0kb downstream 5.0kb downstream 7001 true Scaffold4170: 1368-8368 Capsella grandiflora
Cagra.4170s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4170: 1368-6367 Capsella grandiflora
Cagra.4170s0002 10.0kb upstream 10.0kb upstream 7970 true Scaffold4170: 6368-14337 Capsella grandiflora
Cagra.4170s0002 10.0kb upstream 10.0kb upstream 5969 false Scaffold4170: 8369-14337 Capsella grandiflora
Cagra.4170s0002 10.0kb downstream 10.0kb downstream 8368 true Scaffold4170: 1-8368 Capsella grandiflora
Cagra.4170s0002 10.0kb downstream 10.0kb downstream 6367 false Scaffold4170: 1-6367 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374764 5261 Brassicaceae View MSA
123834348 5264 Brassicales-Malvales View MSA
124340688 5266 SBM View MSA
124254209 5268 Malvidae View MSA
124062619 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain