Gene : Cagra.0417s0009 C. grandiflora v1.1
Defline:  (1 of 12) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  9
Name:  ? Cagra.0417s0009 Secondary Identifier:  ? PAC:28902601
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0417s0009 0.5kb upstream 0.5kb upstream 1438 true Scaffold417: 40850-42287 Capsella grandiflora
Cagra.0417s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold417: 41788-42287 Capsella grandiflora
Cagra.0417s0009 0.5kb downstream 0.5kb downstream 1438 true Scaffold417: 40350-41787 Capsella grandiflora
Cagra.0417s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold417: 40350-40849 Capsella grandiflora
Cagra.0417s0009 1.0kb upstream 1.0kb upstream 1938 true Scaffold417: 40850-42787 Capsella grandiflora
Cagra.0417s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold417: 41788-42787 Capsella grandiflora
Cagra.0417s0009 1.0kb downstream 1.0kb downstream 1938 true Scaffold417: 39850-41787 Capsella grandiflora
Cagra.0417s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold417: 39850-40849 Capsella grandiflora
Cagra.0417s0009 2.0kb upstream 2.0kb upstream 2938 true Scaffold417: 40850-43787 Capsella grandiflora
Cagra.0417s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold417: 41788-43787 Capsella grandiflora
Cagra.0417s0009 2.0kb downstream 2.0kb downstream 2938 true Scaffold417: 38850-41787 Capsella grandiflora
Cagra.0417s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold417: 38850-40849 Capsella grandiflora
Cagra.0417s0009 5.0kb upstream 5.0kb upstream 5938 true Scaffold417: 40850-46787 Capsella grandiflora
Cagra.0417s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold417: 41788-46787 Capsella grandiflora
Cagra.0417s0009 5.0kb downstream 5.0kb downstream 5938 true Scaffold417: 35850-41787 Capsella grandiflora
Cagra.0417s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold417: 35850-40849 Capsella grandiflora
Cagra.0417s0009 10.0kb upstream 10.0kb upstream 10938 true Scaffold417: 40850-51787 Capsella grandiflora
Cagra.0417s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold417: 41788-51787 Capsella grandiflora
Cagra.0417s0009 10.0kb downstream 10.0kb downstream 10938 true Scaffold417: 30850-41787 Capsella grandiflora
Cagra.0417s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold417: 30850-40849 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377709 5261 Brassicaceae View MSA
123830486 5264 Brassicales-Malvales View MSA
124342832 5266 SBM View MSA
124241670 5268 Malvidae View MSA
124064247 5270 Rosid View MSA
123749266 5271 Pentapetalae View MSA
122791238 5272 Eudicot View MSA
122050120 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain