Gene : Cagra.4195s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21668 - EIF-1A Genomic Order:  1
Name:  ? Cagra.4195s0001 Secondary Identifier:  ? PAC:28914494
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4195s0001 0.5kb upstream 0.5kb upstream 293 true Scaffold4195: 1-293 Capsella grandiflora
Cagra.4195s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold4195: 1-2 Capsella grandiflora
Cagra.4195s0001 0.5kb downstream 0.5kb downstream 791 true Scaffold4195: 3-793 Capsella grandiflora
Cagra.4195s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4195: 294-793 Capsella grandiflora
Cagra.4195s0001 1.0kb upstream 1.0kb upstream 293 true Scaffold4195: 1-293 Capsella grandiflora
Cagra.4195s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold4195: 1-2 Capsella grandiflora
Cagra.4195s0001 1.0kb downstream 1.0kb downstream 1291 true Scaffold4195: 3-1293 Capsella grandiflora
Cagra.4195s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4195: 294-1293 Capsella grandiflora
Cagra.4195s0001 2.0kb upstream 2.0kb upstream 293 true Scaffold4195: 1-293 Capsella grandiflora
Cagra.4195s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold4195: 1-2 Capsella grandiflora
Cagra.4195s0001 2.0kb downstream 2.0kb downstream 2291 true Scaffold4195: 3-2293 Capsella grandiflora
Cagra.4195s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4195: 294-2293 Capsella grandiflora
Cagra.4195s0001 5.0kb upstream 5.0kb upstream 293 true Scaffold4195: 1-293 Capsella grandiflora
Cagra.4195s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold4195: 1-2 Capsella grandiflora
Cagra.4195s0001 5.0kb downstream 5.0kb downstream 5291 true Scaffold4195: 3-5293 Capsella grandiflora
Cagra.4195s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4195: 294-5293 Capsella grandiflora
Cagra.4195s0001 10.0kb upstream 10.0kb upstream 293 true Scaffold4195: 1-293 Capsella grandiflora
Cagra.4195s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold4195: 1-2 Capsella grandiflora
Cagra.4195s0001 10.0kb downstream 10.0kb downstream 10291 true Scaffold4195: 3-10293 Capsella grandiflora
Cagra.4195s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold4195: 294-10293 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333734 5261 Brassicaceae Singleton cluster - no MSA
123774648 5264 Brassicales-Malvales Singleton cluster - no MSA
124273080 5266 SBM Singleton cluster - no MSA
124249685 5268 Malvidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain