Gene : Cagra.0434s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14217:SF5 - INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 Genomic Order:  43
Name:  ? Cagra.0434s0043 Secondary Identifier:  ? PAC:28897358
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6365 Capsella grandiflora pathologic  
Cgrandiflora PWY-6366 Capsella grandiflora pathologic  
Cgrandiflora PWY-6554 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0043 0.5kb upstream 0.5kb upstream 1888 true Scaffold434: 155702-157589 Capsella grandiflora
Cagra.0434s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 155702-156201 Capsella grandiflora
Cagra.0434s0043 0.5kb downstream 0.5kb downstream 1888 true Scaffold434: 156202-158089 Capsella grandiflora
Cagra.0434s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 157590-158089 Capsella grandiflora
Cagra.0434s0043 1.0kb upstream 1.0kb upstream 2388 true Scaffold434: 155202-157589 Capsella grandiflora
Cagra.0434s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 155202-156201 Capsella grandiflora
Cagra.0434s0043 1.0kb downstream 1.0kb downstream 2388 true Scaffold434: 156202-158589 Capsella grandiflora
Cagra.0434s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 157590-158589 Capsella grandiflora
Cagra.0434s0043 2.0kb upstream 2.0kb upstream 3388 true Scaffold434: 154202-157589 Capsella grandiflora
Cagra.0434s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 154202-156201 Capsella grandiflora
Cagra.0434s0043 2.0kb downstream 2.0kb downstream 3388 true Scaffold434: 156202-159589 Capsella grandiflora
Cagra.0434s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 157590-159589 Capsella grandiflora
Cagra.0434s0043 5.0kb upstream 5.0kb upstream 6388 true Scaffold434: 151202-157589 Capsella grandiflora
Cagra.0434s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 151202-156201 Capsella grandiflora
Cagra.0434s0043 5.0kb downstream 5.0kb downstream 6388 true Scaffold434: 156202-162589 Capsella grandiflora
Cagra.0434s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 157590-162589 Capsella grandiflora
Cagra.0434s0043 10.0kb upstream 10.0kb upstream 11388 true Scaffold434: 146202-157589 Capsella grandiflora
Cagra.0434s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 146202-156201 Capsella grandiflora
Cagra.0434s0043 10.0kb downstream 10.0kb downstream 11388 true Scaffold434: 156202-167589 Capsella grandiflora
Cagra.0434s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 157590-167589 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374022 5261 Brassicaceae View MSA
123839978 5264 Brassicales-Malvales View MSA
124343476 5266 SBM View MSA
124253590 5268 Malvidae View MSA
124070914 5270 Rosid View MSA
123749813 5271 Pentapetalae View MSA
122787239 5272 Eudicot View MSA
122047492 5273 Angiosperm View MSA
121347186 5274 Embryophyte View MSA
123428803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain