Gene : Cagra.0434s0060 C. grandiflora v1.1
Defline:  (1 of 1) PTHR28620:SF1 - PROTEIN F25B4.8, ISOFORM A Genomic Order:  60
Name:  ? Cagra.0434s0060 Secondary Identifier:  ? PAC:28897394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0060 0.5kb upstream 0.5kb upstream 908 true Scaffold434: 217178-218085 Capsella grandiflora
Cagra.0434s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 217586-218085 Capsella grandiflora
Cagra.0434s0060 0.5kb downstream 0.5kb downstream 908 true Scaffold434: 216678-217585 Capsella grandiflora
Cagra.0434s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 216678-217177 Capsella grandiflora
Cagra.0434s0060 1.0kb upstream 1.0kb upstream 1408 true Scaffold434: 217178-218585 Capsella grandiflora
Cagra.0434s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 217586-218585 Capsella grandiflora
Cagra.0434s0060 1.0kb downstream 1.0kb downstream 1408 true Scaffold434: 216178-217585 Capsella grandiflora
Cagra.0434s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 216178-217177 Capsella grandiflora
Cagra.0434s0060 2.0kb upstream 2.0kb upstream 2408 true Scaffold434: 217178-219585 Capsella grandiflora
Cagra.0434s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 217586-219585 Capsella grandiflora
Cagra.0434s0060 2.0kb downstream 2.0kb downstream 2408 true Scaffold434: 215178-217585 Capsella grandiflora
Cagra.0434s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 215178-217177 Capsella grandiflora
Cagra.0434s0060 5.0kb upstream 5.0kb upstream 5408 true Scaffold434: 217178-222585 Capsella grandiflora
Cagra.0434s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 217586-222585 Capsella grandiflora
Cagra.0434s0060 5.0kb downstream 5.0kb downstream 5408 true Scaffold434: 212178-217585 Capsella grandiflora
Cagra.0434s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 212178-217177 Capsella grandiflora
Cagra.0434s0060 10.0kb upstream 10.0kb upstream 10408 true Scaffold434: 217178-227585 Capsella grandiflora
Cagra.0434s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 217586-227585 Capsella grandiflora
Cagra.0434s0060 10.0kb downstream 10.0kb downstream 10408 true Scaffold434: 207178-217585 Capsella grandiflora
Cagra.0434s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 207178-217177 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360911 5261 Brassicaceae View MSA
123829951 5264 Brassicales-Malvales View MSA
124341654 5266 SBM View MSA
124245278 5268 Malvidae View MSA
124068266 5270 Rosid View MSA
123738048 5271 Pentapetalae View MSA
122791227 5272 Eudicot View MSA
122046805 5273 Angiosperm View MSA
121351715 5274 Embryophyte View MSA
123426563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain