Gene : Cagra.0427s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR27005:SF56 - PROTEIN KINASE SUPERFAMILY PROTEIN Genomic Order:  2
Name:  ? Cagra.0427s0002 Secondary Identifier:  ? PAC:28897646
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0427s0002 0.5kb upstream 0.5kb upstream 2420 true Scaffold427: 3922-6341 Capsella grandiflora
Cagra.0427s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold427: 5842-6341 Capsella grandiflora
Cagra.0427s0002 0.5kb downstream 0.5kb downstream 2420 true Scaffold427: 3422-5841 Capsella grandiflora
Cagra.0427s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold427: 3422-3921 Capsella grandiflora
Cagra.0427s0002 1.0kb upstream 1.0kb upstream 2920 true Scaffold427: 3922-6841 Capsella grandiflora
Cagra.0427s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold427: 5842-6841 Capsella grandiflora
Cagra.0427s0002 1.0kb downstream 1.0kb downstream 2920 true Scaffold427: 2922-5841 Capsella grandiflora
Cagra.0427s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold427: 2922-3921 Capsella grandiflora
Cagra.0427s0002 2.0kb upstream 2.0kb upstream 3920 true Scaffold427: 3922-7841 Capsella grandiflora
Cagra.0427s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold427: 5842-7841 Capsella grandiflora
Cagra.0427s0002 2.0kb downstream 2.0kb downstream 3920 true Scaffold427: 1922-5841 Capsella grandiflora
Cagra.0427s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold427: 1922-3921 Capsella grandiflora
Cagra.0427s0002 5.0kb upstream 5.0kb upstream 6920 true Scaffold427: 3922-10841 Capsella grandiflora
Cagra.0427s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold427: 5842-10841 Capsella grandiflora
Cagra.0427s0002 5.0kb downstream 5.0kb downstream 5841 true Scaffold427: 1-5841 Capsella grandiflora
Cagra.0427s0002 5.0kb downstream 5.0kb downstream 3921 false Scaffold427: 1-3921 Capsella grandiflora
Cagra.0427s0002 10.0kb upstream 10.0kb upstream 11920 true Scaffold427: 3922-15841 Capsella grandiflora
Cagra.0427s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold427: 5842-15841 Capsella grandiflora
Cagra.0427s0002 10.0kb downstream 10.0kb downstream 5841 true Scaffold427: 1-5841 Capsella grandiflora
Cagra.0427s0002 10.0kb downstream 10.0kb downstream 3921 false Scaffold427: 1-3921 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372316 5261 Brassicaceae View MSA
123832268 5264 Brassicales-Malvales View MSA
124339270 5266 SBM View MSA
124239381 5268 Malvidae View MSA
124064830 5270 Rosid View MSA
123748865 5271 Pentapetalae View MSA
122793730 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain