Gene : Cagra.0430s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33264:SF5 - EXPRESSED PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.0430s0001 Secondary Identifier:  ? PAC:28917357
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0001 0.5kb upstream 0.5kb upstream 1360 true Scaffold430: 1-1360 Capsella grandiflora
Cagra.0430s0001 0.5kb upstream 0.5kb upstream 105 false Scaffold430: 1-105 Capsella grandiflora
Cagra.0430s0001 0.5kb downstream 0.5kb downstream 1755 true Scaffold430: 106-1860 Capsella grandiflora
Cagra.0430s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 1361-1860 Capsella grandiflora
Cagra.0430s0001 1.0kb upstream 1.0kb upstream 1360 true Scaffold430: 1-1360 Capsella grandiflora
Cagra.0430s0001 1.0kb upstream 1.0kb upstream 105 false Scaffold430: 1-105 Capsella grandiflora
Cagra.0430s0001 1.0kb downstream 1.0kb downstream 2255 true Scaffold430: 106-2360 Capsella grandiflora
Cagra.0430s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 1361-2360 Capsella grandiflora
Cagra.0430s0001 2.0kb upstream 2.0kb upstream 1360 true Scaffold430: 1-1360 Capsella grandiflora
Cagra.0430s0001 2.0kb upstream 2.0kb upstream 105 false Scaffold430: 1-105 Capsella grandiflora
Cagra.0430s0001 2.0kb downstream 2.0kb downstream 3255 true Scaffold430: 106-3360 Capsella grandiflora
Cagra.0430s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 1361-3360 Capsella grandiflora
Cagra.0430s0001 5.0kb upstream 5.0kb upstream 1360 true Scaffold430: 1-1360 Capsella grandiflora
Cagra.0430s0001 5.0kb upstream 5.0kb upstream 105 false Scaffold430: 1-105 Capsella grandiflora
Cagra.0430s0001 5.0kb downstream 5.0kb downstream 6255 true Scaffold430: 106-6360 Capsella grandiflora
Cagra.0430s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 1361-6360 Capsella grandiflora
Cagra.0430s0001 10.0kb upstream 10.0kb upstream 1360 true Scaffold430: 1-1360 Capsella grandiflora
Cagra.0430s0001 10.0kb upstream 10.0kb upstream 105 false Scaffold430: 1-105 Capsella grandiflora
Cagra.0430s0001 10.0kb downstream 10.0kb downstream 11255 true Scaffold430: 106-11360 Capsella grandiflora
Cagra.0430s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 1361-11360 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363991 5261 Brassicaceae View MSA
123798662 5264 Brassicales-Malvales View MSA
124296270 5266 SBM View MSA
124247277 5268 Malvidae View MSA
124063253 5270 Rosid View MSA
123746370 5271 Pentapetalae View MSA
122792575 5272 Eudicot View MSA
122043918 5273 Angiosperm View MSA
121310210 5274 Embryophyte View MSA
123347762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain