Gene : Cagra.0542s0028 C. grandiflora v1.1
Defline:  (1 of 19) PF07714//PF11721 - Protein tyrosine kinase (Pkinase_Tyr) // Di-glucose binding within endoplasmic reticulum (Malectin) Genomic Order:  28
Name:  ? Cagra.0542s0028 Secondary Identifier:  ? PAC:28916765
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0542s0028 0.5kb upstream 0.5kb upstream 3324 true Scaffold542: 102888-106211 Capsella grandiflora
Cagra.0542s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold542: 102888-103387 Capsella grandiflora
Cagra.0542s0028 0.5kb downstream 0.5kb downstream 3324 true Scaffold542: 103388-106711 Capsella grandiflora
Cagra.0542s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold542: 106212-106711 Capsella grandiflora
Cagra.0542s0028 1.0kb upstream 1.0kb upstream 3824 true Scaffold542: 102388-106211 Capsella grandiflora
Cagra.0542s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold542: 102388-103387 Capsella grandiflora
Cagra.0542s0028 1.0kb downstream 1.0kb downstream 3824 true Scaffold542: 103388-107211 Capsella grandiflora
Cagra.0542s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold542: 106212-107211 Capsella grandiflora
Cagra.0542s0028 2.0kb upstream 2.0kb upstream 4824 true Scaffold542: 101388-106211 Capsella grandiflora
Cagra.0542s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold542: 101388-103387 Capsella grandiflora
Cagra.0542s0028 2.0kb downstream 2.0kb downstream 4824 true Scaffold542: 103388-108211 Capsella grandiflora
Cagra.0542s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold542: 106212-108211 Capsella grandiflora
Cagra.0542s0028 5.0kb upstream 5.0kb upstream 7824 true Scaffold542: 98388-106211 Capsella grandiflora
Cagra.0542s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold542: 98388-103387 Capsella grandiflora
Cagra.0542s0028 5.0kb downstream 5.0kb downstream 7824 true Scaffold542: 103388-111211 Capsella grandiflora
Cagra.0542s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold542: 106212-111211 Capsella grandiflora
Cagra.0542s0028 10.0kb upstream 10.0kb upstream 12824 true Scaffold542: 93388-106211 Capsella grandiflora
Cagra.0542s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold542: 93388-103387 Capsella grandiflora
Cagra.0542s0028 10.0kb downstream 10.0kb downstream 12824 true Scaffold542: 103388-116211 Capsella grandiflora
Cagra.0542s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold542: 106212-116211 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369422 5261 Brassicaceae View MSA
123830134 5264 Brassicales-Malvales View MSA
124340183 5266 SBM View MSA
124253409 5268 Malvidae View MSA
124064554 5270 Rosid View MSA
123740895 5271 Pentapetalae View MSA
122788029 5272 Eudicot View MSA
122047957 5273 Angiosperm View MSA
121310822 5274 Embryophyte View MSA
123348213 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain