Gene : Cagra.0542s0054 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31677:SF24 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF106 Genomic Order:  54
Name:  ? Cagra.0542s0054 Secondary Identifier:  ? PAC:28916828
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0542s0054 0.5kb upstream 0.5kb upstream 1100 true Scaffold542: 203338-204437 Capsella grandiflora
Cagra.0542s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold542: 203938-204437 Capsella grandiflora
Cagra.0542s0054 0.5kb downstream 0.5kb downstream 1100 true Scaffold542: 202838-203937 Capsella grandiflora
Cagra.0542s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold542: 202838-203337 Capsella grandiflora
Cagra.0542s0054 1.0kb upstream 1.0kb upstream 1600 true Scaffold542: 203338-204937 Capsella grandiflora
Cagra.0542s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold542: 203938-204937 Capsella grandiflora
Cagra.0542s0054 1.0kb downstream 1.0kb downstream 1600 true Scaffold542: 202338-203937 Capsella grandiflora
Cagra.0542s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold542: 202338-203337 Capsella grandiflora
Cagra.0542s0054 2.0kb upstream 2.0kb upstream 2600 true Scaffold542: 203338-205937 Capsella grandiflora
Cagra.0542s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold542: 203938-205937 Capsella grandiflora
Cagra.0542s0054 2.0kb downstream 2.0kb downstream 2600 true Scaffold542: 201338-203937 Capsella grandiflora
Cagra.0542s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold542: 201338-203337 Capsella grandiflora
Cagra.0542s0054 5.0kb upstream 5.0kb upstream 5600 true Scaffold542: 203338-208937 Capsella grandiflora
Cagra.0542s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold542: 203938-208937 Capsella grandiflora
Cagra.0542s0054 5.0kb downstream 5.0kb downstream 5600 true Scaffold542: 198338-203937 Capsella grandiflora
Cagra.0542s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold542: 198338-203337 Capsella grandiflora
Cagra.0542s0054 10.0kb upstream 10.0kb upstream 10600 true Scaffold542: 203338-213937 Capsella grandiflora
Cagra.0542s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold542: 203938-213937 Capsella grandiflora
Cagra.0542s0054 10.0kb downstream 10.0kb downstream 10600 true Scaffold542: 193338-203937 Capsella grandiflora
Cagra.0542s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold542: 193338-203337 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370147 5261 Brassicaceae View MSA
123837546 5264 Brassicales-Malvales View MSA
124337526 5266 SBM View MSA
124248001 5268 Malvidae View MSA
124040353 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain