Gene : Cagra.0534s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13068//PTHR13068:SF36 - CGI-12 PROTEIN-RELATED Genomic Order:  10
Name:  ? Cagra.0534s0010 Secondary Identifier:  ? PAC:28907636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0534s0010 0.5kb upstream 0.5kb upstream 1545 true Scaffold534: 49084-50628 Capsella grandiflora
Cagra.0534s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold534: 49084-49583 Capsella grandiflora
Cagra.0534s0010 0.5kb downstream 0.5kb downstream 1545 true Scaffold534: 49584-51128 Capsella grandiflora
Cagra.0534s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold534: 50629-51128 Capsella grandiflora
Cagra.0534s0010 1.0kb upstream 1.0kb upstream 2045 true Scaffold534: 48584-50628 Capsella grandiflora
Cagra.0534s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold534: 48584-49583 Capsella grandiflora
Cagra.0534s0010 1.0kb downstream 1.0kb downstream 2045 true Scaffold534: 49584-51628 Capsella grandiflora
Cagra.0534s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold534: 50629-51628 Capsella grandiflora
Cagra.0534s0010 2.0kb upstream 2.0kb upstream 3045 true Scaffold534: 47584-50628 Capsella grandiflora
Cagra.0534s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold534: 47584-49583 Capsella grandiflora
Cagra.0534s0010 2.0kb downstream 2.0kb downstream 3045 true Scaffold534: 49584-52628 Capsella grandiflora
Cagra.0534s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold534: 50629-52628 Capsella grandiflora
Cagra.0534s0010 5.0kb upstream 5.0kb upstream 6045 true Scaffold534: 44584-50628 Capsella grandiflora
Cagra.0534s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold534: 44584-49583 Capsella grandiflora
Cagra.0534s0010 5.0kb downstream 5.0kb downstream 6045 true Scaffold534: 49584-55628 Capsella grandiflora
Cagra.0534s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold534: 50629-55628 Capsella grandiflora
Cagra.0534s0010 10.0kb upstream 10.0kb upstream 11045 true Scaffold534: 39584-50628 Capsella grandiflora
Cagra.0534s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold534: 39584-49583 Capsella grandiflora
Cagra.0534s0010 10.0kb downstream 10.0kb downstream 11045 true Scaffold534: 49584-60628 Capsella grandiflora
Cagra.0534s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold534: 50629-60628 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367754 5261 Brassicaceae View MSA
123827445 5264 Brassicales-Malvales View MSA
124345901 5266 SBM View MSA
124238457 5268 Malvidae View MSA
124067504 5270 Rosid View MSA
123741152 5271 Pentapetalae View MSA
122793489 5272 Eudicot View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain