Gene : Cagra.0495s0060 C. grandiflora v1.1
Defline:  (1 of 3) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  60
Name:  ? Cagra.0495s0060 Secondary Identifier:  ? PAC:28897090
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0495s0060 0.5kb upstream 0.5kb upstream 1966 true Scaffold495: 199831-201796 Capsella grandiflora
Cagra.0495s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold495: 199831-200330 Capsella grandiflora
Cagra.0495s0060 0.5kb downstream 0.5kb downstream 1966 true Scaffold495: 200331-202296 Capsella grandiflora
Cagra.0495s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold495: 201797-202296 Capsella grandiflora
Cagra.0495s0060 1.0kb upstream 1.0kb upstream 2466 true Scaffold495: 199331-201796 Capsella grandiflora
Cagra.0495s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold495: 199331-200330 Capsella grandiflora
Cagra.0495s0060 1.0kb downstream 1.0kb downstream 2466 true Scaffold495: 200331-202796 Capsella grandiflora
Cagra.0495s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold495: 201797-202796 Capsella grandiflora
Cagra.0495s0060 2.0kb upstream 2.0kb upstream 3466 true Scaffold495: 198331-201796 Capsella grandiflora
Cagra.0495s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold495: 198331-200330 Capsella grandiflora
Cagra.0495s0060 2.0kb downstream 2.0kb downstream 3466 true Scaffold495: 200331-203796 Capsella grandiflora
Cagra.0495s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold495: 201797-203796 Capsella grandiflora
Cagra.0495s0060 5.0kb upstream 5.0kb upstream 6466 true Scaffold495: 195331-201796 Capsella grandiflora
Cagra.0495s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold495: 195331-200330 Capsella grandiflora
Cagra.0495s0060 5.0kb downstream 5.0kb downstream 6466 true Scaffold495: 200331-206796 Capsella grandiflora
Cagra.0495s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold495: 201797-206796 Capsella grandiflora
Cagra.0495s0060 10.0kb upstream 10.0kb upstream 11466 true Scaffold495: 190331-201796 Capsella grandiflora
Cagra.0495s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold495: 190331-200330 Capsella grandiflora
Cagra.0495s0060 10.0kb downstream 10.0kb downstream 11466 true Scaffold495: 200331-211796 Capsella grandiflora
Cagra.0495s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold495: 201797-211796 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367977 5261 Brassicaceae View MSA
123841324 5264 Brassicales-Malvales View MSA
124344801 5266 SBM View MSA
124248474 5268 Malvidae View MSA
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain