Gene : Cagra.0483s0049 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11562:SF31 - RE54080P Genomic Order:  49
Name:  ? Cagra.0483s0049 Secondary Identifier:  ? PAC:28900383
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0483s0049 0.5kb upstream 0.5kb upstream 1535 true Scaffold483: 163547-165081 Capsella grandiflora
Cagra.0483s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold483: 164582-165081 Capsella grandiflora
Cagra.0483s0049 0.5kb downstream 0.5kb downstream 1535 true Scaffold483: 163047-164581 Capsella grandiflora
Cagra.0483s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold483: 163047-163546 Capsella grandiflora
Cagra.0483s0049 1.0kb upstream 1.0kb upstream 2035 true Scaffold483: 163547-165581 Capsella grandiflora
Cagra.0483s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold483: 164582-165581 Capsella grandiflora
Cagra.0483s0049 1.0kb downstream 1.0kb downstream 2035 true Scaffold483: 162547-164581 Capsella grandiflora
Cagra.0483s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold483: 162547-163546 Capsella grandiflora
Cagra.0483s0049 2.0kb upstream 2.0kb upstream 3035 true Scaffold483: 163547-166581 Capsella grandiflora
Cagra.0483s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold483: 164582-166581 Capsella grandiflora
Cagra.0483s0049 2.0kb downstream 2.0kb downstream 3035 true Scaffold483: 161547-164581 Capsella grandiflora
Cagra.0483s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold483: 161547-163546 Capsella grandiflora
Cagra.0483s0049 5.0kb upstream 5.0kb upstream 6035 true Scaffold483: 163547-169581 Capsella grandiflora
Cagra.0483s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold483: 164582-169581 Capsella grandiflora
Cagra.0483s0049 5.0kb downstream 5.0kb downstream 6035 true Scaffold483: 158547-164581 Capsella grandiflora
Cagra.0483s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold483: 158547-163546 Capsella grandiflora
Cagra.0483s0049 10.0kb upstream 10.0kb upstream 11035 true Scaffold483: 163547-174581 Capsella grandiflora
Cagra.0483s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold483: 164582-174581 Capsella grandiflora
Cagra.0483s0049 10.0kb downstream 10.0kb downstream 11035 true Scaffold483: 153547-164581 Capsella grandiflora
Cagra.0483s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold483: 153547-163546 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781819 5273 Angiosperm View MSA
122377298 5261 Brassicaceae View MSA
123801495 5264 Brassicales-Malvales View MSA
124298792 5266 SBM View MSA
124150357 5268 Malvidae View MSA
123875984 5270 Rosid View MSA
123750678 5271 Pentapetalae View MSA
122773794 5272 Eudicot View MSA
121350376 5274 Embryophyte View MSA
123427530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain