Gene : Cagra.0483s0084 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33978:SF2 - EXPRESSED PROTEIN Genomic Order:  84
Name:  ? Cagra.0483s0084 Secondary Identifier:  ? PAC:28900379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0483s0084 0.5kb upstream 0.5kb upstream 917 true Scaffold483: 303433-304349 Capsella grandiflora
Cagra.0483s0084 0.5kb upstream 0.5kb upstream 500 false Scaffold483: 303850-304349 Capsella grandiflora
Cagra.0483s0084 0.5kb downstream 0.5kb downstream 917 true Scaffold483: 302933-303849 Capsella grandiflora
Cagra.0483s0084 0.5kb downstream 0.5kb downstream 500 false Scaffold483: 302933-303432 Capsella grandiflora
Cagra.0483s0084 1.0kb upstream 1.0kb upstream 1417 true Scaffold483: 303433-304849 Capsella grandiflora
Cagra.0483s0084 1.0kb upstream 1.0kb upstream 1000 false Scaffold483: 303850-304849 Capsella grandiflora
Cagra.0483s0084 1.0kb downstream 1.0kb downstream 1417 true Scaffold483: 302433-303849 Capsella grandiflora
Cagra.0483s0084 1.0kb downstream 1.0kb downstream 1000 false Scaffold483: 302433-303432 Capsella grandiflora
Cagra.0483s0084 2.0kb upstream 2.0kb upstream 2417 true Scaffold483: 303433-305849 Capsella grandiflora
Cagra.0483s0084 2.0kb upstream 2.0kb upstream 2000 false Scaffold483: 303850-305849 Capsella grandiflora
Cagra.0483s0084 2.0kb downstream 2.0kb downstream 2417 true Scaffold483: 301433-303849 Capsella grandiflora
Cagra.0483s0084 2.0kb downstream 2.0kb downstream 2000 false Scaffold483: 301433-303432 Capsella grandiflora
Cagra.0483s0084 5.0kb upstream 5.0kb upstream 5417 true Scaffold483: 303433-308849 Capsella grandiflora
Cagra.0483s0084 5.0kb upstream 5.0kb upstream 5000 false Scaffold483: 303850-308849 Capsella grandiflora
Cagra.0483s0084 5.0kb downstream 5.0kb downstream 5417 true Scaffold483: 298433-303849 Capsella grandiflora
Cagra.0483s0084 5.0kb downstream 5.0kb downstream 5000 false Scaffold483: 298433-303432 Capsella grandiflora
Cagra.0483s0084 10.0kb upstream 10.0kb upstream 10417 true Scaffold483: 303433-313849 Capsella grandiflora
Cagra.0483s0084 10.0kb upstream 10.0kb upstream 10000 false Scaffold483: 303850-313849 Capsella grandiflora
Cagra.0483s0084 10.0kb downstream 10.0kb downstream 10417 true Scaffold483: 293433-303849 Capsella grandiflora
Cagra.0483s0084 10.0kb downstream 10.0kb downstream 10000 false Scaffold483: 293433-303432 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
122372050 5261 Brassicaceae View MSA
123838413 5264 Brassicales-Malvales View MSA
124322448 5266 SBM View MSA
124238415 5268 Malvidae View MSA
124073990 5270 Rosid View MSA
123746126 5271 Pentapetalae View MSA
122796980 5272 Eudicot View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain