Gene : Cagra.0568s0056 C. grandiflora v1.1
Defline:  (1 of 11) PTHR31662:SF1 - A_IG002N01.32 PROTEIN-RELATED Genomic Order:  56
Name:  ? Cagra.0568s0056 Secondary Identifier:  ? PAC:28910993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0056 0.5kb upstream 0.5kb upstream 1673 true Scaffold568: 185071-186743 Capsella grandiflora
Cagra.0568s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 186244-186743 Capsella grandiflora
Cagra.0568s0056 0.5kb downstream 0.5kb downstream 1673 true Scaffold568: 184571-186243 Capsella grandiflora
Cagra.0568s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 184571-185070 Capsella grandiflora
Cagra.0568s0056 1.0kb upstream 1.0kb upstream 2173 true Scaffold568: 185071-187243 Capsella grandiflora
Cagra.0568s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 186244-187243 Capsella grandiflora
Cagra.0568s0056 1.0kb downstream 1.0kb downstream 2173 true Scaffold568: 184071-186243 Capsella grandiflora
Cagra.0568s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 184071-185070 Capsella grandiflora
Cagra.0568s0056 2.0kb upstream 2.0kb upstream 3173 true Scaffold568: 185071-188243 Capsella grandiflora
Cagra.0568s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 186244-188243 Capsella grandiflora
Cagra.0568s0056 2.0kb downstream 2.0kb downstream 3173 true Scaffold568: 183071-186243 Capsella grandiflora
Cagra.0568s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 183071-185070 Capsella grandiflora
Cagra.0568s0056 5.0kb upstream 5.0kb upstream 6173 true Scaffold568: 185071-191243 Capsella grandiflora
Cagra.0568s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 186244-191243 Capsella grandiflora
Cagra.0568s0056 5.0kb downstream 5.0kb downstream 6173 true Scaffold568: 180071-186243 Capsella grandiflora
Cagra.0568s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 180071-185070 Capsella grandiflora
Cagra.0568s0056 10.0kb upstream 10.0kb upstream 11173 true Scaffold568: 185071-196243 Capsella grandiflora
Cagra.0568s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 186244-196243 Capsella grandiflora
Cagra.0568s0056 10.0kb downstream 10.0kb downstream 11173 true Scaffold568: 175071-186243 Capsella grandiflora
Cagra.0568s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 175071-185070 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374387 5261 Brassicaceae View MSA
123837501 5264 Brassicales-Malvales View MSA
124345875 5266 SBM View MSA
124252419 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain