Gene : Cagra.0562s0048 C. grandiflora v1.1
Defline:  (1 of 7) PF07839 - Plant calmodulin-binding domain (CaM_binding) Genomic Order:  48
Name:  ? Cagra.0562s0048 Secondary Identifier:  ? PAC:28910762
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0562s0048 0.5kb upstream 0.5kb upstream 1772 true Scaffold562: 171981-173752 Capsella grandiflora
Cagra.0562s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold562: 173253-173752 Capsella grandiflora
Cagra.0562s0048 0.5kb downstream 0.5kb downstream 1772 true Scaffold562: 171481-173252 Capsella grandiflora
Cagra.0562s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold562: 171481-171980 Capsella grandiflora
Cagra.0562s0048 1.0kb upstream 1.0kb upstream 2272 true Scaffold562: 171981-174252 Capsella grandiflora
Cagra.0562s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold562: 173253-174252 Capsella grandiflora
Cagra.0562s0048 1.0kb downstream 1.0kb downstream 2272 true Scaffold562: 170981-173252 Capsella grandiflora
Cagra.0562s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold562: 170981-171980 Capsella grandiflora
Cagra.0562s0048 2.0kb upstream 2.0kb upstream 3272 true Scaffold562: 171981-175252 Capsella grandiflora
Cagra.0562s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold562: 173253-175252 Capsella grandiflora
Cagra.0562s0048 2.0kb downstream 2.0kb downstream 3272 true Scaffold562: 169981-173252 Capsella grandiflora
Cagra.0562s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold562: 169981-171980 Capsella grandiflora
Cagra.0562s0048 5.0kb upstream 5.0kb upstream 6272 true Scaffold562: 171981-178252 Capsella grandiflora
Cagra.0562s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold562: 173253-178252 Capsella grandiflora
Cagra.0562s0048 5.0kb downstream 5.0kb downstream 6272 true Scaffold562: 166981-173252 Capsella grandiflora
Cagra.0562s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold562: 166981-171980 Capsella grandiflora
Cagra.0562s0048 10.0kb upstream 10.0kb upstream 11272 true Scaffold562: 171981-183252 Capsella grandiflora
Cagra.0562s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold562: 173253-183252 Capsella grandiflora
Cagra.0562s0048 10.0kb downstream 10.0kb downstream 11272 true Scaffold562: 161981-173252 Capsella grandiflora
Cagra.0562s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold562: 161981-171980 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343529 5261 Brassicaceae View MSA
123783703 5264 Brassicales-Malvales View MSA
124281921 5266 SBM View MSA
124136595 5268 Malvidae View MSA
123864432 5270 Rosid View MSA
123751830 5271 Pentapetalae View MSA
122794379 5272 Eudicot View MSA
122048644 5273 Angiosperm View MSA
121311054 5274 Embryophyte View MSA
123348408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain