Gene : Cagra.0567s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33057:SF22 - OVATE FAMILY PROTEIN 1-RELATED Genomic Order:  7
Name:  ? Cagra.0567s0007 Secondary Identifier:  ? PAC:28910748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0567s0007 0.5kb upstream 0.5kb upstream 1517 true Scaffold567: 28684-30200 Capsella grandiflora
Cagra.0567s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold567: 28684-29183 Capsella grandiflora
Cagra.0567s0007 0.5kb downstream 0.5kb downstream 1517 true Scaffold567: 29184-30700 Capsella grandiflora
Cagra.0567s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold567: 30201-30700 Capsella grandiflora
Cagra.0567s0007 1.0kb upstream 1.0kb upstream 2017 true Scaffold567: 28184-30200 Capsella grandiflora
Cagra.0567s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold567: 28184-29183 Capsella grandiflora
Cagra.0567s0007 1.0kb downstream 1.0kb downstream 2017 true Scaffold567: 29184-31200 Capsella grandiflora
Cagra.0567s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold567: 30201-31200 Capsella grandiflora
Cagra.0567s0007 2.0kb upstream 2.0kb upstream 3017 true Scaffold567: 27184-30200 Capsella grandiflora
Cagra.0567s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold567: 27184-29183 Capsella grandiflora
Cagra.0567s0007 2.0kb downstream 2.0kb downstream 3017 true Scaffold567: 29184-32200 Capsella grandiflora
Cagra.0567s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold567: 30201-32200 Capsella grandiflora
Cagra.0567s0007 5.0kb upstream 5.0kb upstream 6017 true Scaffold567: 24184-30200 Capsella grandiflora
Cagra.0567s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold567: 24184-29183 Capsella grandiflora
Cagra.0567s0007 5.0kb downstream 5.0kb downstream 6017 true Scaffold567: 29184-35200 Capsella grandiflora
Cagra.0567s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold567: 30201-35200 Capsella grandiflora
Cagra.0567s0007 10.0kb upstream 10.0kb upstream 11017 true Scaffold567: 19184-30200 Capsella grandiflora
Cagra.0567s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold567: 19184-29183 Capsella grandiflora
Cagra.0567s0007 10.0kb downstream 10.0kb downstream 11017 true Scaffold567: 29184-40200 Capsella grandiflora
Cagra.0567s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold567: 30201-40200 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368626 5261 Brassicaceae View MSA
123838582 5264 Brassicales-Malvales View MSA
124350794 5266 SBM View MSA
124251031 5268 Malvidae View MSA
124070169 5270 Rosid View MSA
123750394 5271 Pentapetalae View MSA
122789866 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain