Gene : Cagra.0612s0047 C. grandiflora v1.1
Defline:  (1 of 21) PF08137 - DVL family (DVL) Genomic Order:  47
Name:  ? Cagra.0612s0047 Secondary Identifier:  ? PAC:28917539
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0047 0.5kb upstream 0.5kb upstream 677 true Scaffold612: 164504-165180 Capsella grandiflora
Cagra.0612s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 164681-165180 Capsella grandiflora
Cagra.0612s0047 0.5kb downstream 0.5kb downstream 677 true Scaffold612: 164004-164680 Capsella grandiflora
Cagra.0612s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 164004-164503 Capsella grandiflora
Cagra.0612s0047 1.0kb upstream 1.0kb upstream 1177 true Scaffold612: 164504-165680 Capsella grandiflora
Cagra.0612s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 164681-165680 Capsella grandiflora
Cagra.0612s0047 1.0kb downstream 1.0kb downstream 1177 true Scaffold612: 163504-164680 Capsella grandiflora
Cagra.0612s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 163504-164503 Capsella grandiflora
Cagra.0612s0047 2.0kb upstream 2.0kb upstream 2177 true Scaffold612: 164504-166680 Capsella grandiflora
Cagra.0612s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 164681-166680 Capsella grandiflora
Cagra.0612s0047 2.0kb downstream 2.0kb downstream 2177 true Scaffold612: 162504-164680 Capsella grandiflora
Cagra.0612s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 162504-164503 Capsella grandiflora
Cagra.0612s0047 5.0kb upstream 5.0kb upstream 5177 true Scaffold612: 164504-169680 Capsella grandiflora
Cagra.0612s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 164681-169680 Capsella grandiflora
Cagra.0612s0047 5.0kb downstream 5.0kb downstream 5177 true Scaffold612: 159504-164680 Capsella grandiflora
Cagra.0612s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 159504-164503 Capsella grandiflora
Cagra.0612s0047 10.0kb upstream 10.0kb upstream 10177 true Scaffold612: 164504-174680 Capsella grandiflora
Cagra.0612s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 164681-174680 Capsella grandiflora
Cagra.0612s0047 10.0kb downstream 10.0kb downstream 10177 true Scaffold612: 154504-164680 Capsella grandiflora
Cagra.0612s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 154504-164503 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380105 5261 Brassicaceae View MSA
123802563 5264 Brassicales-Malvales View MSA
124299749 5266 SBM View MSA
124151078 5268 Malvidae View MSA
123876586 5270 Rosid View MSA
123751811 5271 Pentapetalae View MSA
122789066 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain