Gene : Cagra.4849s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21193:SF3 - OXIDOREDUCTASE-LIKE DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  6
Name:  ? Cagra.4849s0006 Secondary Identifier:  ? PAC:28898043
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4849s0006 0.5kb upstream 0.5kb upstream 1206 true Scaffold4849: 22383-23588 Capsella grandiflora
Cagra.4849s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold4849: 23089-23588 Capsella grandiflora
Cagra.4849s0006 0.5kb downstream 0.5kb downstream 1206 true Scaffold4849: 21883-23088 Capsella grandiflora
Cagra.4849s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold4849: 21883-22382 Capsella grandiflora
Cagra.4849s0006 1.0kb upstream 1.0kb upstream 1706 true Scaffold4849: 22383-24088 Capsella grandiflora
Cagra.4849s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold4849: 23089-24088 Capsella grandiflora
Cagra.4849s0006 1.0kb downstream 1.0kb downstream 1706 true Scaffold4849: 21383-23088 Capsella grandiflora
Cagra.4849s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold4849: 21383-22382 Capsella grandiflora
Cagra.4849s0006 2.0kb upstream 2.0kb upstream 2706 true Scaffold4849: 22383-25088 Capsella grandiflora
Cagra.4849s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold4849: 23089-25088 Capsella grandiflora
Cagra.4849s0006 2.0kb downstream 2.0kb downstream 2706 true Scaffold4849: 20383-23088 Capsella grandiflora
Cagra.4849s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold4849: 20383-22382 Capsella grandiflora
Cagra.4849s0006 5.0kb upstream 5.0kb upstream 5706 true Scaffold4849: 22383-28088 Capsella grandiflora
Cagra.4849s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold4849: 23089-28088 Capsella grandiflora
Cagra.4849s0006 5.0kb downstream 5.0kb downstream 5706 true Scaffold4849: 17383-23088 Capsella grandiflora
Cagra.4849s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold4849: 17383-22382 Capsella grandiflora
Cagra.4849s0006 10.0kb upstream 10.0kb upstream 10706 true Scaffold4849: 22383-33088 Capsella grandiflora
Cagra.4849s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold4849: 23089-33088 Capsella grandiflora
Cagra.4849s0006 10.0kb downstream 10.0kb downstream 10706 true Scaffold4849: 12383-23088 Capsella grandiflora
Cagra.4849s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold4849: 12383-22382 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362083 5261 Brassicaceae View MSA
123841103 5264 Brassicales-Malvales View MSA
124344871 5266 SBM View MSA
124245431 5268 Malvidae View MSA
124039019 5270 Rosid View MSA
123746716 5271 Pentapetalae View MSA
122797705 5272 Eudicot View MSA
122049661 5273 Angiosperm View MSA
121311527 5274 Embryophyte View MSA
123348812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain