Gene : Cagra.0605s0046 C. grandiflora v1.1
Defline:  (1 of 5) PF04554 - Extensin-like region (Extensin_2) Genomic Order:  46
Name:  ? Cagra.0605s0046 Secondary Identifier:  ? PAC:28917852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0605s0046 0.5kb upstream 0.5kb upstream 1325 true Scaffold605: 143271-144595 Capsella grandiflora
Cagra.0605s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold605: 144096-144595 Capsella grandiflora
Cagra.0605s0046 0.5kb downstream 0.5kb downstream 1325 true Scaffold605: 142771-144095 Capsella grandiflora
Cagra.0605s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold605: 142771-143270 Capsella grandiflora
Cagra.0605s0046 1.0kb upstream 1.0kb upstream 1825 true Scaffold605: 143271-145095 Capsella grandiflora
Cagra.0605s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold605: 144096-145095 Capsella grandiflora
Cagra.0605s0046 1.0kb downstream 1.0kb downstream 1825 true Scaffold605: 142271-144095 Capsella grandiflora
Cagra.0605s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold605: 142271-143270 Capsella grandiflora
Cagra.0605s0046 2.0kb upstream 2.0kb upstream 2825 true Scaffold605: 143271-146095 Capsella grandiflora
Cagra.0605s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold605: 144096-146095 Capsella grandiflora
Cagra.0605s0046 2.0kb downstream 2.0kb downstream 2825 true Scaffold605: 141271-144095 Capsella grandiflora
Cagra.0605s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold605: 141271-143270 Capsella grandiflora
Cagra.0605s0046 5.0kb upstream 5.0kb upstream 5825 true Scaffold605: 143271-149095 Capsella grandiflora
Cagra.0605s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold605: 144096-149095 Capsella grandiflora
Cagra.0605s0046 5.0kb downstream 5.0kb downstream 5825 true Scaffold605: 138271-144095 Capsella grandiflora
Cagra.0605s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold605: 138271-143270 Capsella grandiflora
Cagra.0605s0046 10.0kb upstream 10.0kb upstream 10825 true Scaffold605: 143271-154095 Capsella grandiflora
Cagra.0605s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold605: 144096-154095 Capsella grandiflora
Cagra.0605s0046 10.0kb downstream 10.0kb downstream 10825 true Scaffold605: 133271-144095 Capsella grandiflora
Cagra.0605s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold605: 133271-143270 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374945 5261 Brassicaceae View MSA
123831018 5264 Brassicales-Malvales View MSA
124321706 5266 SBM View MSA
124169046 5268 Malvidae View MSA
124072659 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain