Gene : Cagra.0605s0079 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11721 - 60S RIBOSOMAL PROTEIN L27A Genomic Order:  79
Name:  ? Cagra.0605s0079 Secondary Identifier:  ? PAC:28917846
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0605s0079 0.5kb upstream 0.5kb upstream 941 true Scaffold605: 250357-251297 Capsella grandiflora
Cagra.0605s0079 0.5kb upstream 0.5kb upstream 500 false Scaffold605: 250798-251297 Capsella grandiflora
Cagra.0605s0079 0.5kb downstream 0.5kb downstream 941 true Scaffold605: 249857-250797 Capsella grandiflora
Cagra.0605s0079 0.5kb downstream 0.5kb downstream 500 false Scaffold605: 249857-250356 Capsella grandiflora
Cagra.0605s0079 1.0kb upstream 1.0kb upstream 1441 true Scaffold605: 250357-251797 Capsella grandiflora
Cagra.0605s0079 1.0kb upstream 1.0kb upstream 1000 false Scaffold605: 250798-251797 Capsella grandiflora
Cagra.0605s0079 1.0kb downstream 1.0kb downstream 1441 true Scaffold605: 249357-250797 Capsella grandiflora
Cagra.0605s0079 1.0kb downstream 1.0kb downstream 1000 false Scaffold605: 249357-250356 Capsella grandiflora
Cagra.0605s0079 2.0kb upstream 2.0kb upstream 2441 true Scaffold605: 250357-252797 Capsella grandiflora
Cagra.0605s0079 2.0kb upstream 2.0kb upstream 2000 false Scaffold605: 250798-252797 Capsella grandiflora
Cagra.0605s0079 2.0kb downstream 2.0kb downstream 2441 true Scaffold605: 248357-250797 Capsella grandiflora
Cagra.0605s0079 2.0kb downstream 2.0kb downstream 2000 false Scaffold605: 248357-250356 Capsella grandiflora
Cagra.0605s0079 5.0kb upstream 5.0kb upstream 5441 true Scaffold605: 250357-255797 Capsella grandiflora
Cagra.0605s0079 5.0kb upstream 5.0kb upstream 5000 false Scaffold605: 250798-255797 Capsella grandiflora
Cagra.0605s0079 5.0kb downstream 5.0kb downstream 5441 true Scaffold605: 245357-250797 Capsella grandiflora
Cagra.0605s0079 5.0kb downstream 5.0kb downstream 5000 false Scaffold605: 245357-250356 Capsella grandiflora
Cagra.0605s0079 10.0kb upstream 10.0kb upstream 10441 true Scaffold605: 250357-260797 Capsella grandiflora
Cagra.0605s0079 10.0kb upstream 10.0kb upstream 10000 false Scaffold605: 250798-260797 Capsella grandiflora
Cagra.0605s0079 10.0kb downstream 10.0kb downstream 10441 true Scaffold605: 240357-250797 Capsella grandiflora
Cagra.0605s0079 10.0kb downstream 10.0kb downstream 10000 false Scaffold605: 240357-250356 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367377 5261 Brassicaceae View MSA
123799341 5264 Brassicales-Malvales View MSA
124296871 5266 SBM View MSA
124250214 5268 Malvidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain