Gene : Cagra.0594s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10202 - PRESENILIN Genomic Order:  2
Name:  ? Cagra.0594s0002 Secondary Identifier:  ? PAC:28901659
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0594s0002 0.5kb upstream 0.5kb upstream 1873 true Scaffold594: 7931-9803 Capsella grandiflora
Cagra.0594s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold594: 7931-8430 Capsella grandiflora
Cagra.0594s0002 0.5kb downstream 0.5kb downstream 1873 true Scaffold594: 8431-10303 Capsella grandiflora
Cagra.0594s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold594: 9804-10303 Capsella grandiflora
Cagra.0594s0002 1.0kb upstream 1.0kb upstream 2373 true Scaffold594: 7431-9803 Capsella grandiflora
Cagra.0594s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold594: 7431-8430 Capsella grandiflora
Cagra.0594s0002 1.0kb downstream 1.0kb downstream 2373 true Scaffold594: 8431-10803 Capsella grandiflora
Cagra.0594s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold594: 9804-10803 Capsella grandiflora
Cagra.0594s0002 2.0kb upstream 2.0kb upstream 3373 true Scaffold594: 6431-9803 Capsella grandiflora
Cagra.0594s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold594: 6431-8430 Capsella grandiflora
Cagra.0594s0002 2.0kb downstream 2.0kb downstream 3373 true Scaffold594: 8431-11803 Capsella grandiflora
Cagra.0594s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold594: 9804-11803 Capsella grandiflora
Cagra.0594s0002 5.0kb upstream 5.0kb upstream 6373 true Scaffold594: 3431-9803 Capsella grandiflora
Cagra.0594s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold594: 3431-8430 Capsella grandiflora
Cagra.0594s0002 5.0kb downstream 5.0kb downstream 6373 true Scaffold594: 8431-14803 Capsella grandiflora
Cagra.0594s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold594: 9804-14803 Capsella grandiflora
Cagra.0594s0002 10.0kb upstream 10.0kb upstream 9803 true Scaffold594: 1-9803 Capsella grandiflora
Cagra.0594s0002 10.0kb upstream 10.0kb upstream 8430 false Scaffold594: 1-8430 Capsella grandiflora
Cagra.0594s0002 10.0kb downstream 10.0kb downstream 11373 true Scaffold594: 8431-19803 Capsella grandiflora
Cagra.0594s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold594: 9804-19803 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366816 5261 Brassicaceae View MSA
123829143 5264 Brassicales-Malvales View MSA
124321576 5266 SBM View MSA
124239111 5268 Malvidae View MSA
124063592 5270 Rosid View MSA
123748546 5271 Pentapetalae View MSA
122790840 5272 Eudicot View MSA
122049657 5273 Angiosperm View MSA
121347498 5274 Embryophyte View MSA
123424512 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain