Gene : Cagra.4609s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22952:SF110 - BZIP PROTEIN (ATBZIP48)-RELATED Genomic Order:  4
Name:  ? Cagra.4609s0004 Secondary Identifier:  ? PAC:28901450
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4609s0004 0.5kb upstream 0.5kb upstream 1001 true Scaffold4609: 6751-7751 Capsella grandiflora
Cagra.4609s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4609: 6751-7250 Capsella grandiflora
Cagra.4609s0004 0.5kb downstream 0.5kb downstream 1001 true Scaffold4609: 7251-8251 Capsella grandiflora
Cagra.4609s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4609: 7752-8251 Capsella grandiflora
Cagra.4609s0004 1.0kb upstream 1.0kb upstream 1501 true Scaffold4609: 6251-7751 Capsella grandiflora
Cagra.4609s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4609: 6251-7250 Capsella grandiflora
Cagra.4609s0004 1.0kb downstream 1.0kb downstream 1501 true Scaffold4609: 7251-8751 Capsella grandiflora
Cagra.4609s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4609: 7752-8751 Capsella grandiflora
Cagra.4609s0004 2.0kb upstream 2.0kb upstream 2501 true Scaffold4609: 5251-7751 Capsella grandiflora
Cagra.4609s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4609: 5251-7250 Capsella grandiflora
Cagra.4609s0004 2.0kb downstream 2.0kb downstream 2501 true Scaffold4609: 7251-9751 Capsella grandiflora
Cagra.4609s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4609: 7752-9751 Capsella grandiflora
Cagra.4609s0004 5.0kb upstream 5.0kb upstream 5501 true Scaffold4609: 2251-7751 Capsella grandiflora
Cagra.4609s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4609: 2251-7250 Capsella grandiflora
Cagra.4609s0004 5.0kb downstream 5.0kb downstream 5501 true Scaffold4609: 7251-12751 Capsella grandiflora
Cagra.4609s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4609: 7752-12751 Capsella grandiflora
Cagra.4609s0004 10.0kb upstream 10.0kb upstream 7751 true Scaffold4609: 1-7751 Capsella grandiflora
Cagra.4609s0004 10.0kb upstream 10.0kb upstream 7250 false Scaffold4609: 1-7250 Capsella grandiflora
Cagra.4609s0004 10.0kb downstream 10.0kb downstream 10501 true Scaffold4609: 7251-17751 Capsella grandiflora
Cagra.4609s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4609: 7752-17751 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375478 5261 Brassicaceae View MSA
123840763 5264 Brassicales-Malvales View MSA
124338284 5266 SBM View MSA
124245537 5268 Malvidae View MSA
124069862 5270 Rosid View MSA
123747742 5271 Pentapetalae View MSA
122794625 5272 Eudicot View MSA
122049154 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain