Gene : Cagra.4622s0008 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11926:SF326 - ANTHOCYANIDIN 3-O-GLUCOSIDE 2'''-O-XYLOSYLTRANSFERASE-RELATED Genomic Order:  8
Name:  ? Cagra.4622s0008 Secondary Identifier:  ? PAC:28897765
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7678 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4622s0008 0.5kb upstream 0.5kb upstream 1841 true Scaffold4622: 25061-26901 Capsella grandiflora
Cagra.4622s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold4622: 26402-26901 Capsella grandiflora
Cagra.4622s0008 0.5kb downstream 0.5kb downstream 1841 true Scaffold4622: 24561-26401 Capsella grandiflora
Cagra.4622s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold4622: 24561-25060 Capsella grandiflora
Cagra.4622s0008 1.0kb upstream 1.0kb upstream 2341 true Scaffold4622: 25061-27401 Capsella grandiflora
Cagra.4622s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold4622: 26402-27401 Capsella grandiflora
Cagra.4622s0008 1.0kb downstream 1.0kb downstream 2341 true Scaffold4622: 24061-26401 Capsella grandiflora
Cagra.4622s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold4622: 24061-25060 Capsella grandiflora
Cagra.4622s0008 2.0kb upstream 2.0kb upstream 3341 true Scaffold4622: 25061-28401 Capsella grandiflora
Cagra.4622s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold4622: 26402-28401 Capsella grandiflora
Cagra.4622s0008 2.0kb downstream 2.0kb downstream 3341 true Scaffold4622: 23061-26401 Capsella grandiflora
Cagra.4622s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold4622: 23061-25060 Capsella grandiflora
Cagra.4622s0008 5.0kb upstream 5.0kb upstream 6341 true Scaffold4622: 25061-31401 Capsella grandiflora
Cagra.4622s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold4622: 26402-31401 Capsella grandiflora
Cagra.4622s0008 5.0kb downstream 5.0kb downstream 6341 true Scaffold4622: 20061-26401 Capsella grandiflora
Cagra.4622s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold4622: 20061-25060 Capsella grandiflora
Cagra.4622s0008 10.0kb upstream 10.0kb upstream 11341 true Scaffold4622: 25061-36401 Capsella grandiflora
Cagra.4622s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold4622: 26402-36401 Capsella grandiflora
Cagra.4622s0008 10.0kb downstream 10.0kb downstream 11341 true Scaffold4622: 15061-26401 Capsella grandiflora
Cagra.4622s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold4622: 15061-25060 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379165 5261 Brassicaceae View MSA
123839739 5264 Brassicales-Malvales View MSA
124346901 5266 SBM View MSA
124241012 5268 Malvidae View MSA
124064648 5270 Rosid View MSA
123753607 5271 Pentapetalae View MSA
122797779 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain