Gene : Cagra.4497s0001 C. grandiflora v1.1
Defline:  (1 of 34) PTHR31232:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED Genomic Order:  1
Name:  ? Cagra.4497s0001 Secondary Identifier:  ? PAC:28911607
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4497s0001 0.5kb upstream 0.5kb upstream 905 true Scaffold4497: 2146-3050 Capsella grandiflora
Cagra.4497s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4497: 2146-2645 Capsella grandiflora
Cagra.4497s0001 0.5kb downstream 0.5kb downstream 905 true Scaffold4497: 2646-3550 Capsella grandiflora
Cagra.4497s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4497: 3051-3550 Capsella grandiflora
Cagra.4497s0001 1.0kb upstream 1.0kb upstream 1405 true Scaffold4497: 1646-3050 Capsella grandiflora
Cagra.4497s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4497: 1646-2645 Capsella grandiflora
Cagra.4497s0001 1.0kb downstream 1.0kb downstream 1405 true Scaffold4497: 2646-4050 Capsella grandiflora
Cagra.4497s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4497: 3051-4050 Capsella grandiflora
Cagra.4497s0001 2.0kb upstream 2.0kb upstream 2405 true Scaffold4497: 646-3050 Capsella grandiflora
Cagra.4497s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold4497: 646-2645 Capsella grandiflora
Cagra.4497s0001 2.0kb downstream 2.0kb downstream 2405 true Scaffold4497: 2646-5050 Capsella grandiflora
Cagra.4497s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4497: 3051-5050 Capsella grandiflora
Cagra.4497s0001 5.0kb upstream 5.0kb upstream 3050 true Scaffold4497: 1-3050 Capsella grandiflora
Cagra.4497s0001 5.0kb upstream 5.0kb upstream 2645 false Scaffold4497: 1-2645 Capsella grandiflora
Cagra.4497s0001 5.0kb downstream 5.0kb downstream 5405 true Scaffold4497: 2646-8050 Capsella grandiflora
Cagra.4497s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4497: 3051-8050 Capsella grandiflora
Cagra.4497s0001 10.0kb upstream 10.0kb upstream 3050 true Scaffold4497: 1-3050 Capsella grandiflora
Cagra.4497s0001 10.0kb upstream 10.0kb upstream 2645 false Scaffold4497: 1-2645 Capsella grandiflora
Cagra.4497s0001 10.0kb downstream 10.0kb downstream 10405 true Scaffold4497: 2646-13050 Capsella grandiflora
Cagra.4497s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold4497: 3051-13050 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369361 5261 Brassicaceae View MSA
123799762 5264 Brassicales-Malvales View MSA
124297251 5266 SBM View MSA
124252657 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain