Gene : Cagra.0666s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR26374:SF198 - ZINC FINGER PROTEIN ZAT11 Genomic Order:  1
Name:  ? Cagra.0666s0001 Secondary Identifier:  ? PAC:28911316
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0666s0001 0.5kb upstream 0.5kb upstream 1052 true Scaffold666: 308-1359 Capsella grandiflora
Cagra.0666s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold666: 860-1359 Capsella grandiflora
Cagra.0666s0001 0.5kb downstream 0.5kb downstream 859 true Scaffold666: 1-859 Capsella grandiflora
Cagra.0666s0001 0.5kb downstream 0.5kb downstream 307 false Scaffold666: 1-307 Capsella grandiflora
Cagra.0666s0001 1.0kb upstream 1.0kb upstream 1552 true Scaffold666: 308-1859 Capsella grandiflora
Cagra.0666s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold666: 860-1859 Capsella grandiflora
Cagra.0666s0001 1.0kb downstream 1.0kb downstream 859 true Scaffold666: 1-859 Capsella grandiflora
Cagra.0666s0001 1.0kb downstream 1.0kb downstream 307 false Scaffold666: 1-307 Capsella grandiflora
Cagra.0666s0001 2.0kb upstream 2.0kb upstream 2552 true Scaffold666: 308-2859 Capsella grandiflora
Cagra.0666s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold666: 860-2859 Capsella grandiflora
Cagra.0666s0001 2.0kb downstream 2.0kb downstream 859 true Scaffold666: 1-859 Capsella grandiflora
Cagra.0666s0001 2.0kb downstream 2.0kb downstream 307 false Scaffold666: 1-307 Capsella grandiflora
Cagra.0666s0001 5.0kb upstream 5.0kb upstream 5552 true Scaffold666: 308-5859 Capsella grandiflora
Cagra.0666s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold666: 860-5859 Capsella grandiflora
Cagra.0666s0001 5.0kb downstream 5.0kb downstream 859 true Scaffold666: 1-859 Capsella grandiflora
Cagra.0666s0001 5.0kb downstream 5.0kb downstream 307 false Scaffold666: 1-307 Capsella grandiflora
Cagra.0666s0001 10.0kb upstream 10.0kb upstream 10552 true Scaffold666: 308-10859 Capsella grandiflora
Cagra.0666s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold666: 860-10859 Capsella grandiflora
Cagra.0666s0001 10.0kb downstream 10.0kb downstream 859 true Scaffold666: 1-859 Capsella grandiflora
Cagra.0666s0001 10.0kb downstream 10.0kb downstream 307 false Scaffold666: 1-307 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365960 5261 Brassicaceae View MSA
123840529 5264 Brassicales-Malvales View MSA
124345241 5266 SBM View MSA
124250734 5268 Malvidae View MSA
124071249 5270 Rosid View MSA
123747694 5271 Pentapetalae View MSA
122796352 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain