Gene : Cagra.0666s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31374:SF45 - AUXIN-RESPONSIVE FAMILY PROTEIN Genomic Order:  43
Name:  ? Cagra.0666s0043 Secondary Identifier:  ? PAC:28911322
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0666s0043 0.5kb upstream 0.5kb upstream 1138 true Scaffold666: 168158-169295 Capsella grandiflora
Cagra.0666s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold666: 168796-169295 Capsella grandiflora
Cagra.0666s0043 0.5kb downstream 0.5kb downstream 1138 true Scaffold666: 167658-168795 Capsella grandiflora
Cagra.0666s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold666: 167658-168157 Capsella grandiflora
Cagra.0666s0043 1.0kb upstream 1.0kb upstream 1638 true Scaffold666: 168158-169795 Capsella grandiflora
Cagra.0666s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold666: 168796-169795 Capsella grandiflora
Cagra.0666s0043 1.0kb downstream 1.0kb downstream 1638 true Scaffold666: 167158-168795 Capsella grandiflora
Cagra.0666s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold666: 167158-168157 Capsella grandiflora
Cagra.0666s0043 2.0kb upstream 2.0kb upstream 2638 true Scaffold666: 168158-170795 Capsella grandiflora
Cagra.0666s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold666: 168796-170795 Capsella grandiflora
Cagra.0666s0043 2.0kb downstream 2.0kb downstream 2638 true Scaffold666: 166158-168795 Capsella grandiflora
Cagra.0666s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold666: 166158-168157 Capsella grandiflora
Cagra.0666s0043 5.0kb upstream 5.0kb upstream 4379 true Scaffold666: 168158-172536 Capsella grandiflora
Cagra.0666s0043 5.0kb upstream 5.0kb upstream 3741 false Scaffold666: 168796-172536 Capsella grandiflora
Cagra.0666s0043 5.0kb downstream 5.0kb downstream 5638 true Scaffold666: 163158-168795 Capsella grandiflora
Cagra.0666s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold666: 163158-168157 Capsella grandiflora
Cagra.0666s0043 10.0kb upstream 10.0kb upstream 4379 true Scaffold666: 168158-172536 Capsella grandiflora
Cagra.0666s0043 10.0kb upstream 10.0kb upstream 3741 false Scaffold666: 168796-172536 Capsella grandiflora
Cagra.0666s0043 10.0kb downstream 10.0kb downstream 10638 true Scaffold666: 158158-168795 Capsella grandiflora
Cagra.0666s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold666: 158158-168157 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361330 5261 Brassicaceae View MSA
123830280 5264 Brassicales-Malvales View MSA
124349849 5266 SBM View MSA
124253821 5268 Malvidae View MSA
124066016 5270 Rosid View MSA
123737947 5271 Pentapetalae View MSA
122793585 5272 Eudicot View MSA
122045137 5273 Angiosperm View MSA
121310404 5274 Embryophyte View MSA
123347894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain