Gene : Cagra.0683s0012 C. grandiflora v1.1
Defline:  (1 of 19) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  12
Name:  ? Cagra.0683s0012 Secondary Identifier:  ? PAC:28914990
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0683s0012 0.5kb upstream 0.5kb upstream 857 true Scaffold683: 46336-47192 Capsella grandiflora
Cagra.0683s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold683: 46693-47192 Capsella grandiflora
Cagra.0683s0012 0.5kb downstream 0.5kb downstream 857 true Scaffold683: 45836-46692 Capsella grandiflora
Cagra.0683s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold683: 45836-46335 Capsella grandiflora
Cagra.0683s0012 1.0kb upstream 1.0kb upstream 1357 true Scaffold683: 46336-47692 Capsella grandiflora
Cagra.0683s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold683: 46693-47692 Capsella grandiflora
Cagra.0683s0012 1.0kb downstream 1.0kb downstream 1357 true Scaffold683: 45336-46692 Capsella grandiflora
Cagra.0683s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold683: 45336-46335 Capsella grandiflora
Cagra.0683s0012 2.0kb upstream 2.0kb upstream 2357 true Scaffold683: 46336-48692 Capsella grandiflora
Cagra.0683s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold683: 46693-48692 Capsella grandiflora
Cagra.0683s0012 2.0kb downstream 2.0kb downstream 2357 true Scaffold683: 44336-46692 Capsella grandiflora
Cagra.0683s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold683: 44336-46335 Capsella grandiflora
Cagra.0683s0012 5.0kb upstream 5.0kb upstream 5357 true Scaffold683: 46336-51692 Capsella grandiflora
Cagra.0683s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold683: 46693-51692 Capsella grandiflora
Cagra.0683s0012 5.0kb downstream 5.0kb downstream 5357 true Scaffold683: 41336-46692 Capsella grandiflora
Cagra.0683s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold683: 41336-46335 Capsella grandiflora
Cagra.0683s0012 10.0kb upstream 10.0kb upstream 10357 true Scaffold683: 46336-56692 Capsella grandiflora
Cagra.0683s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold683: 46693-56692 Capsella grandiflora
Cagra.0683s0012 10.0kb downstream 10.0kb downstream 10357 true Scaffold683: 36336-46692 Capsella grandiflora
Cagra.0683s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold683: 36336-46335 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511734 5273 Angiosperm View MSA
122378489 5261 Brassicaceae View MSA
123801880 5264 Brassicales-Malvales View MSA
124299133 5266 SBM View MSA
124150626 5268 Malvidae View MSA
123876208 5270 Rosid View MSA
123459911 5271 Pentapetalae View MSA
122495293 5272 Eudicot View MSA
120784767 5274 Embryophyte View MSA
122826662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain