Gene : Cagra.0683s0010 C. grandiflora v1.1
Defline:  (1 of 19) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  10
Name:  ? Cagra.0683s0010 Secondary Identifier:  ? PAC:28914987
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0683s0010 0.5kb upstream 0.5kb upstream 851 true Scaffold683: 41024-41874 Capsella grandiflora
Cagra.0683s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold683: 41375-41874 Capsella grandiflora
Cagra.0683s0010 0.5kb downstream 0.5kb downstream 851 true Scaffold683: 40524-41374 Capsella grandiflora
Cagra.0683s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold683: 40524-41023 Capsella grandiflora
Cagra.0683s0010 1.0kb upstream 1.0kb upstream 1351 true Scaffold683: 41024-42374 Capsella grandiflora
Cagra.0683s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold683: 41375-42374 Capsella grandiflora
Cagra.0683s0010 1.0kb downstream 1.0kb downstream 1351 true Scaffold683: 40024-41374 Capsella grandiflora
Cagra.0683s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold683: 40024-41023 Capsella grandiflora
Cagra.0683s0010 2.0kb upstream 2.0kb upstream 2351 true Scaffold683: 41024-43374 Capsella grandiflora
Cagra.0683s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold683: 41375-43374 Capsella grandiflora
Cagra.0683s0010 2.0kb downstream 2.0kb downstream 2351 true Scaffold683: 39024-41374 Capsella grandiflora
Cagra.0683s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold683: 39024-41023 Capsella grandiflora
Cagra.0683s0010 5.0kb upstream 5.0kb upstream 5351 true Scaffold683: 41024-46374 Capsella grandiflora
Cagra.0683s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold683: 41375-46374 Capsella grandiflora
Cagra.0683s0010 5.0kb downstream 5.0kb downstream 5351 true Scaffold683: 36024-41374 Capsella grandiflora
Cagra.0683s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold683: 36024-41023 Capsella grandiflora
Cagra.0683s0010 10.0kb upstream 10.0kb upstream 10351 true Scaffold683: 41024-51374 Capsella grandiflora
Cagra.0683s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold683: 41375-51374 Capsella grandiflora
Cagra.0683s0010 10.0kb downstream 10.0kb downstream 10351 true Scaffold683: 31024-41374 Capsella grandiflora
Cagra.0683s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold683: 31024-41023 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511734 5273 Angiosperm View MSA
122378489 5261 Brassicaceae View MSA
123801880 5264 Brassicales-Malvales View MSA
124299133 5266 SBM View MSA
124150626 5268 Malvidae View MSA
123876208 5270 Rosid View MSA
123459911 5271 Pentapetalae View MSA
122495293 5272 Eudicot View MSA
120784767 5274 Embryophyte View MSA
122826662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain