Gene : Cagra.0645s0030 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  30
Name:  ? Cagra.0645s0030 Secondary Identifier:  ? PAC:28896913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0645s0030 0.5kb upstream 0.5kb upstream 2669 true Scaffold645: 114615-117283 Capsella grandiflora
Cagra.0645s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold645: 114615-115114 Capsella grandiflora
Cagra.0645s0030 0.5kb downstream 0.5kb downstream 2669 true Scaffold645: 115115-117783 Capsella grandiflora
Cagra.0645s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold645: 117284-117783 Capsella grandiflora
Cagra.0645s0030 1.0kb upstream 1.0kb upstream 3169 true Scaffold645: 114115-117283 Capsella grandiflora
Cagra.0645s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold645: 114115-115114 Capsella grandiflora
Cagra.0645s0030 1.0kb downstream 1.0kb downstream 3169 true Scaffold645: 115115-118283 Capsella grandiflora
Cagra.0645s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold645: 117284-118283 Capsella grandiflora
Cagra.0645s0030 2.0kb upstream 2.0kb upstream 4169 true Scaffold645: 113115-117283 Capsella grandiflora
Cagra.0645s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold645: 113115-115114 Capsella grandiflora
Cagra.0645s0030 2.0kb downstream 2.0kb downstream 4169 true Scaffold645: 115115-119283 Capsella grandiflora
Cagra.0645s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold645: 117284-119283 Capsella grandiflora
Cagra.0645s0030 5.0kb upstream 5.0kb upstream 7169 true Scaffold645: 110115-117283 Capsella grandiflora
Cagra.0645s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold645: 110115-115114 Capsella grandiflora
Cagra.0645s0030 5.0kb downstream 5.0kb downstream 7169 true Scaffold645: 115115-122283 Capsella grandiflora
Cagra.0645s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold645: 117284-122283 Capsella grandiflora
Cagra.0645s0030 10.0kb upstream 10.0kb upstream 12169 true Scaffold645: 105115-117283 Capsella grandiflora
Cagra.0645s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold645: 105115-115114 Capsella grandiflora
Cagra.0645s0030 10.0kb downstream 10.0kb downstream 12169 true Scaffold645: 115115-127283 Capsella grandiflora
Cagra.0645s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold645: 117284-127283 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363346 5261 Brassicaceae View MSA
123830662 5264 Brassicales-Malvales View MSA
124345517 5266 SBM View MSA
124252608 5268 Malvidae View MSA
124060522 5270 Rosid View MSA
123738847 5271 Pentapetalae View MSA
122790244 5272 Eudicot View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain