Gene : Cagra.0664s0048 C. grandiflora v1.1
Defline:  (1 of 6) 2.5.1.112 - Adenylate dimethylallyltransferase (ADP/ATP-dependent) / Isopentenyltransferase Genomic Order:  48
Name:  ? Cagra.0664s0048 Secondary Identifier:  ? PAC:28911835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2681 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0664s0048 0.5kb upstream 0.5kb upstream 1520 true Scaffold664: 150543-152062 Capsella grandiflora
Cagra.0664s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold664: 151563-152062 Capsella grandiflora
Cagra.0664s0048 0.5kb downstream 0.5kb downstream 1520 true Scaffold664: 150043-151562 Capsella grandiflora
Cagra.0664s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold664: 150043-150542 Capsella grandiflora
Cagra.0664s0048 1.0kb upstream 1.0kb upstream 2020 true Scaffold664: 150543-152562 Capsella grandiflora
Cagra.0664s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold664: 151563-152562 Capsella grandiflora
Cagra.0664s0048 1.0kb downstream 1.0kb downstream 2020 true Scaffold664: 149543-151562 Capsella grandiflora
Cagra.0664s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold664: 149543-150542 Capsella grandiflora
Cagra.0664s0048 2.0kb upstream 2.0kb upstream 3020 true Scaffold664: 150543-153562 Capsella grandiflora
Cagra.0664s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold664: 151563-153562 Capsella grandiflora
Cagra.0664s0048 2.0kb downstream 2.0kb downstream 3020 true Scaffold664: 148543-151562 Capsella grandiflora
Cagra.0664s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold664: 148543-150542 Capsella grandiflora
Cagra.0664s0048 5.0kb upstream 5.0kb upstream 6020 true Scaffold664: 150543-156562 Capsella grandiflora
Cagra.0664s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold664: 151563-156562 Capsella grandiflora
Cagra.0664s0048 5.0kb downstream 5.0kb downstream 6020 true Scaffold664: 145543-151562 Capsella grandiflora
Cagra.0664s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold664: 145543-150542 Capsella grandiflora
Cagra.0664s0048 10.0kb upstream 10.0kb upstream 11020 true Scaffold664: 150543-161562 Capsella grandiflora
Cagra.0664s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold664: 151563-161562 Capsella grandiflora
Cagra.0664s0048 10.0kb downstream 10.0kb downstream 11020 true Scaffold664: 140543-151562 Capsella grandiflora
Cagra.0664s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold664: 140543-150542 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374525 5261 Brassicaceae View MSA
123836221 5264 Brassicales-Malvales View MSA
124350163 5266 SBM View MSA
124241505 5268 Malvidae View MSA
124062328 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain