Gene : Cagra.0629s0021 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32448:SF21 - BERBERINE BRIDGE ENZYME-RELATED Genomic Order:  21
Name:  ? Cagra.0629s0021 Secondary Identifier:  ? PAC:28919919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0629s0021 0.5kb upstream 0.5kb upstream 2096 true Scaffold629: 70071-72166 Capsella grandiflora
Cagra.0629s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold629: 70071-70570 Capsella grandiflora
Cagra.0629s0021 0.5kb downstream 0.5kb downstream 2096 true Scaffold629: 70571-72666 Capsella grandiflora
Cagra.0629s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold629: 72167-72666 Capsella grandiflora
Cagra.0629s0021 1.0kb upstream 1.0kb upstream 2596 true Scaffold629: 69571-72166 Capsella grandiflora
Cagra.0629s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold629: 69571-70570 Capsella grandiflora
Cagra.0629s0021 1.0kb downstream 1.0kb downstream 2596 true Scaffold629: 70571-73166 Capsella grandiflora
Cagra.0629s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold629: 72167-73166 Capsella grandiflora
Cagra.0629s0021 2.0kb upstream 2.0kb upstream 3596 true Scaffold629: 68571-72166 Capsella grandiflora
Cagra.0629s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold629: 68571-70570 Capsella grandiflora
Cagra.0629s0021 2.0kb downstream 2.0kb downstream 3596 true Scaffold629: 70571-74166 Capsella grandiflora
Cagra.0629s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold629: 72167-74166 Capsella grandiflora
Cagra.0629s0021 5.0kb upstream 5.0kb upstream 6596 true Scaffold629: 65571-72166 Capsella grandiflora
Cagra.0629s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold629: 65571-70570 Capsella grandiflora
Cagra.0629s0021 5.0kb downstream 5.0kb downstream 6596 true Scaffold629: 70571-77166 Capsella grandiflora
Cagra.0629s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold629: 72167-77166 Capsella grandiflora
Cagra.0629s0021 10.0kb upstream 10.0kb upstream 11596 true Scaffold629: 60571-72166 Capsella grandiflora
Cagra.0629s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold629: 60571-70570 Capsella grandiflora
Cagra.0629s0021 10.0kb downstream 10.0kb downstream 11596 true Scaffold629: 70571-82166 Capsella grandiflora
Cagra.0629s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold629: 72167-82166 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370650 5261 Brassicaceae View MSA
123836885 5264 Brassicales-Malvales View MSA
124346129 5266 SBM View MSA
124243891 5268 Malvidae View MSA
124070066 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain