Gene : Cagra.0635s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13087 - NF-KAPPA B ACTIVATING PROTEIN Genomic Order:  7
Name:  ? Cagra.0635s0007 Secondary Identifier:  ? PAC:28908380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0635s0007 0.5kb upstream 0.5kb upstream 1982 true Scaffold635: 23045-25026 Capsella grandiflora
Cagra.0635s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold635: 23045-23544 Capsella grandiflora
Cagra.0635s0007 0.5kb downstream 0.5kb downstream 1982 true Scaffold635: 23545-25526 Capsella grandiflora
Cagra.0635s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold635: 25027-25526 Capsella grandiflora
Cagra.0635s0007 1.0kb upstream 1.0kb upstream 2482 true Scaffold635: 22545-25026 Capsella grandiflora
Cagra.0635s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold635: 22545-23544 Capsella grandiflora
Cagra.0635s0007 1.0kb downstream 1.0kb downstream 2482 true Scaffold635: 23545-26026 Capsella grandiflora
Cagra.0635s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold635: 25027-26026 Capsella grandiflora
Cagra.0635s0007 2.0kb upstream 2.0kb upstream 3482 true Scaffold635: 21545-25026 Capsella grandiflora
Cagra.0635s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold635: 21545-23544 Capsella grandiflora
Cagra.0635s0007 2.0kb downstream 2.0kb downstream 3482 true Scaffold635: 23545-27026 Capsella grandiflora
Cagra.0635s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold635: 25027-27026 Capsella grandiflora
Cagra.0635s0007 5.0kb upstream 5.0kb upstream 6482 true Scaffold635: 18545-25026 Capsella grandiflora
Cagra.0635s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold635: 18545-23544 Capsella grandiflora
Cagra.0635s0007 5.0kb downstream 5.0kb downstream 6482 true Scaffold635: 23545-30026 Capsella grandiflora
Cagra.0635s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold635: 25027-30026 Capsella grandiflora
Cagra.0635s0007 10.0kb upstream 10.0kb upstream 11482 true Scaffold635: 13545-25026 Capsella grandiflora
Cagra.0635s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold635: 13545-23544 Capsella grandiflora
Cagra.0635s0007 10.0kb downstream 10.0kb downstream 11482 true Scaffold635: 23545-35026 Capsella grandiflora
Cagra.0635s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold635: 25027-35026 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360964 5261 Brassicaceae View MSA
123828390 5264 Brassicales-Malvales View MSA
124345990 5266 SBM View MSA
124251042 5268 Malvidae View MSA
124063299 5270 Rosid View MSA
123739958 5271 Pentapetalae View MSA
122786035 5272 Eudicot View MSA
122046016 5273 Angiosperm View MSA
121348345 5274 Embryophyte View MSA
123426799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain