Gene : Cagra.4849s0020 C. grandiflora v1.1
Defline:  (1 of 12) PTHR31625:SF5 - ACYLTRANSFERASE-LIKE PROTEIN-RELATED Genomic Order:  20
Name:  ? Cagra.4849s0020 Secondary Identifier:  ? PAC:28898035
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4849s0020 0.5kb upstream 0.5kb upstream 1901 true Scaffold4849: 68518-70418 Capsella grandiflora
Cagra.4849s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold4849: 69919-70418 Capsella grandiflora
Cagra.4849s0020 0.5kb downstream 0.5kb downstream 1901 true Scaffold4849: 68018-69918 Capsella grandiflora
Cagra.4849s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold4849: 68018-68517 Capsella grandiflora
Cagra.4849s0020 1.0kb upstream 1.0kb upstream 2401 true Scaffold4849: 68518-70918 Capsella grandiflora
Cagra.4849s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold4849: 69919-70918 Capsella grandiflora
Cagra.4849s0020 1.0kb downstream 1.0kb downstream 2401 true Scaffold4849: 67518-69918 Capsella grandiflora
Cagra.4849s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold4849: 67518-68517 Capsella grandiflora
Cagra.4849s0020 2.0kb upstream 2.0kb upstream 3401 true Scaffold4849: 68518-71918 Capsella grandiflora
Cagra.4849s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold4849: 69919-71918 Capsella grandiflora
Cagra.4849s0020 2.0kb downstream 2.0kb downstream 3401 true Scaffold4849: 66518-69918 Capsella grandiflora
Cagra.4849s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold4849: 66518-68517 Capsella grandiflora
Cagra.4849s0020 5.0kb upstream 5.0kb upstream 6174 true Scaffold4849: 68518-74691 Capsella grandiflora
Cagra.4849s0020 5.0kb upstream 5.0kb upstream 4773 false Scaffold4849: 69919-74691 Capsella grandiflora
Cagra.4849s0020 5.0kb downstream 5.0kb downstream 6401 true Scaffold4849: 63518-69918 Capsella grandiflora
Cagra.4849s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold4849: 63518-68517 Capsella grandiflora
Cagra.4849s0020 10.0kb upstream 10.0kb upstream 6174 true Scaffold4849: 68518-74691 Capsella grandiflora
Cagra.4849s0020 10.0kb upstream 10.0kb upstream 4773 false Scaffold4849: 69919-74691 Capsella grandiflora
Cagra.4849s0020 10.0kb downstream 10.0kb downstream 11401 true Scaffold4849: 58518-69918 Capsella grandiflora
Cagra.4849s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold4849: 58518-68517 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378194 5261 Brassicaceae View MSA
123840075 5264 Brassicales-Malvales View MSA
124351480 5266 SBM View MSA
124250860 5268 Malvidae View MSA
124073771 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain