Gene : Cagra.0612s0106 C. grandiflora v1.1
Defline:  (1 of 3) PTHR26374:SF192 - C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN-RELATED Genomic Order:  106
Name:  ? Cagra.0612s0106 Secondary Identifier:  ? PAC:28917507
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0612s0106 0.5kb upstream 0.5kb upstream 923 true Scaffold612: 376550-377472 Capsella grandiflora
Cagra.0612s0106 0.5kb upstream 0.5kb upstream 500 false Scaffold612: 376550-377049 Capsella grandiflora
Cagra.0612s0106 0.5kb downstream 0.5kb downstream 923 true Scaffold612: 377050-377972 Capsella grandiflora
Cagra.0612s0106 0.5kb downstream 0.5kb downstream 500 false Scaffold612: 377473-377972 Capsella grandiflora
Cagra.0612s0106 1.0kb upstream 1.0kb upstream 1423 true Scaffold612: 376050-377472 Capsella grandiflora
Cagra.0612s0106 1.0kb upstream 1.0kb upstream 1000 false Scaffold612: 376050-377049 Capsella grandiflora
Cagra.0612s0106 1.0kb downstream 1.0kb downstream 1423 true Scaffold612: 377050-378472 Capsella grandiflora
Cagra.0612s0106 1.0kb downstream 1.0kb downstream 1000 false Scaffold612: 377473-378472 Capsella grandiflora
Cagra.0612s0106 2.0kb upstream 2.0kb upstream 2423 true Scaffold612: 375050-377472 Capsella grandiflora
Cagra.0612s0106 2.0kb upstream 2.0kb upstream 2000 false Scaffold612: 375050-377049 Capsella grandiflora
Cagra.0612s0106 2.0kb downstream 2.0kb downstream 2423 true Scaffold612: 377050-379472 Capsella grandiflora
Cagra.0612s0106 2.0kb downstream 2.0kb downstream 2000 false Scaffold612: 377473-379472 Capsella grandiflora
Cagra.0612s0106 5.0kb upstream 5.0kb upstream 5423 true Scaffold612: 372050-377472 Capsella grandiflora
Cagra.0612s0106 5.0kb upstream 5.0kb upstream 5000 false Scaffold612: 372050-377049 Capsella grandiflora
Cagra.0612s0106 5.0kb downstream 5.0kb downstream 5423 true Scaffold612: 377050-382472 Capsella grandiflora
Cagra.0612s0106 5.0kb downstream 5.0kb downstream 5000 false Scaffold612: 377473-382472 Capsella grandiflora
Cagra.0612s0106 10.0kb upstream 10.0kb upstream 10423 true Scaffold612: 367050-377472 Capsella grandiflora
Cagra.0612s0106 10.0kb upstream 10.0kb upstream 10000 false Scaffold612: 367050-377049 Capsella grandiflora
Cagra.0612s0106 10.0kb downstream 10.0kb downstream 10423 true Scaffold612: 377050-387472 Capsella grandiflora
Cagra.0612s0106 10.0kb downstream 10.0kb downstream 10000 false Scaffold612: 377473-387472 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378709 5261 Brassicaceae View MSA
123837008 5264 Brassicales-Malvales View MSA
124350002 5266 SBM View MSA
124246510 5268 Malvidae View MSA
124070631 5270 Rosid View MSA
123743825 5271 Pentapetalae View MSA
122795650 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain