Gene : Cagra.0751s0016 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11514:SF50 - TRANSCRIPTION FACTOR MYC2-RELATED Genomic Order:  16
Name:  ? Cagra.0751s0016 Secondary Identifier:  ? PAC:28899597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0751s0016 0.5kb upstream 0.5kb upstream 1922 true Scaffold751: 70416-72337 Capsella grandiflora
Cagra.0751s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold751: 71838-72337 Capsella grandiflora
Cagra.0751s0016 0.5kb downstream 0.5kb downstream 1922 true Scaffold751: 69916-71837 Capsella grandiflora
Cagra.0751s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold751: 69916-70415 Capsella grandiflora
Cagra.0751s0016 1.0kb upstream 1.0kb upstream 2422 true Scaffold751: 70416-72837 Capsella grandiflora
Cagra.0751s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold751: 71838-72837 Capsella grandiflora
Cagra.0751s0016 1.0kb downstream 1.0kb downstream 2422 true Scaffold751: 69416-71837 Capsella grandiflora
Cagra.0751s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold751: 69416-70415 Capsella grandiflora
Cagra.0751s0016 2.0kb upstream 2.0kb upstream 3422 true Scaffold751: 70416-73837 Capsella grandiflora
Cagra.0751s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold751: 71838-73837 Capsella grandiflora
Cagra.0751s0016 2.0kb downstream 2.0kb downstream 3422 true Scaffold751: 68416-71837 Capsella grandiflora
Cagra.0751s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold751: 68416-70415 Capsella grandiflora
Cagra.0751s0016 5.0kb upstream 5.0kb upstream 6422 true Scaffold751: 70416-76837 Capsella grandiflora
Cagra.0751s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold751: 71838-76837 Capsella grandiflora
Cagra.0751s0016 5.0kb downstream 5.0kb downstream 6422 true Scaffold751: 65416-71837 Capsella grandiflora
Cagra.0751s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold751: 65416-70415 Capsella grandiflora
Cagra.0751s0016 10.0kb upstream 10.0kb upstream 11422 true Scaffold751: 70416-81837 Capsella grandiflora
Cagra.0751s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold751: 71838-81837 Capsella grandiflora
Cagra.0751s0016 10.0kb downstream 10.0kb downstream 11422 true Scaffold751: 60416-71837 Capsella grandiflora
Cagra.0751s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold751: 60416-70415 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379933 5261 Brassicaceae View MSA
123802487 5264 Brassicales-Malvales View MSA
124349753 5266 SBM View MSA
124246069 5268 Malvidae View MSA
124072195 5270 Rosid View MSA
123752263 5271 Pentapetalae View MSA
122797148 5272 Eudicot View MSA
122048135 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain