Gene : Cagra.5341s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11062:SF56 - XYLOGLUCAN GALACTOSYLTRANSFERASE KATAMARI1 Genomic Order:  5
Name:  ? Cagra.5341s0005 Secondary Identifier:  ? PAC:28908480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5341s0005 0.5kb upstream 0.5kb upstream 2939 true Scaffold5341: 14983-17921 Capsella grandiflora
Cagra.5341s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold5341: 14983-15482 Capsella grandiflora
Cagra.5341s0005 0.5kb downstream 0.5kb downstream 2491 true Scaffold5341: 15483-17973 Capsella grandiflora
Cagra.5341s0005 0.5kb downstream 0.5kb downstream 52 false Scaffold5341: 17922-17973 Capsella grandiflora
Cagra.5341s0005 1.0kb upstream 1.0kb upstream 3439 true Scaffold5341: 14483-17921 Capsella grandiflora
Cagra.5341s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold5341: 14483-15482 Capsella grandiflora
Cagra.5341s0005 1.0kb downstream 1.0kb downstream 2491 true Scaffold5341: 15483-17973 Capsella grandiflora
Cagra.5341s0005 1.0kb downstream 1.0kb downstream 52 false Scaffold5341: 17922-17973 Capsella grandiflora
Cagra.5341s0005 2.0kb upstream 2.0kb upstream 4439 true Scaffold5341: 13483-17921 Capsella grandiflora
Cagra.5341s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold5341: 13483-15482 Capsella grandiflora
Cagra.5341s0005 2.0kb downstream 2.0kb downstream 2491 true Scaffold5341: 15483-17973 Capsella grandiflora
Cagra.5341s0005 2.0kb downstream 2.0kb downstream 52 false Scaffold5341: 17922-17973 Capsella grandiflora
Cagra.5341s0005 5.0kb upstream 5.0kb upstream 7439 true Scaffold5341: 10483-17921 Capsella grandiflora
Cagra.5341s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold5341: 10483-15482 Capsella grandiflora
Cagra.5341s0005 5.0kb downstream 5.0kb downstream 2491 true Scaffold5341: 15483-17973 Capsella grandiflora
Cagra.5341s0005 5.0kb downstream 5.0kb downstream 52 false Scaffold5341: 17922-17973 Capsella grandiflora
Cagra.5341s0005 10.0kb upstream 10.0kb upstream 12439 true Scaffold5341: 5483-17921 Capsella grandiflora
Cagra.5341s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold5341: 5483-15482 Capsella grandiflora
Cagra.5341s0005 10.0kb downstream 10.0kb downstream 2491 true Scaffold5341: 15483-17973 Capsella grandiflora
Cagra.5341s0005 10.0kb downstream 10.0kb downstream 52 false Scaffold5341: 17922-17973 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367900 5261 Brassicaceae View MSA
123832258 5264 Brassicales-Malvales View MSA
124321790 5266 SBM View MSA
124251648 5268 Malvidae View MSA
124072625 5270 Rosid View MSA
123753744 5271 Pentapetalae View MSA
122797324 5272 Eudicot View MSA
122043990 5273 Angiosperm View MSA
121348270 5274 Embryophyte View MSA
123380801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain